RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 NPYP01303 97 aa13.76□□□□□ -0.21
USP53-203ENST00000507597 C10orf126Q8N4M7 172 aa13.76□□□□□ -0.21
USP53-203ENST00000507597 SMIM2Q9BVW6 85 aa13.76□□□□□ -0.21
USP53-203ENST00000507597 KMT2CQ8NEZ4 4911 aaKnown RBP13.75□□□□□ -0.21
USP53-203ENST00000507597 PLECQ15149 4684 aaKnown RBP13.75□□□□□ -0.21
USP53-203ENST00000507597 PRSS47A8MTI9 375 aa13.75□□□□□ -0.21
USP53-203ENST00000507597 RAB5AP20339 215 aa13.75□□□□□ -0.21
USP53-203ENST00000507597 KIAA1644Q3SXP7 199 aa13.75□□□□□ -0.21
USP53-203ENST00000507597 TMEM18Q96B42 140 aa13.75□□□□□ -0.21
USP53-203ENST00000507597 H7C423 109 aa13.74□□□□□ -0.21
USP53-203ENST00000507597 DNAH10OSP0CZ25 163 aa13.74□□□□□ -0.21
USP53-203ENST00000507597 LINC01556Q5JQF7 62 aa13.74□□□□□ -0.21
USP53-203ENST00000507597 NXT2Q9NPJ8 142 aaKnown RBP13.74□□□□□ -0.21
USP53-203ENST00000507597 K7EMI3 77 aa13.73□□□□□ -0.21
USP53-203ENST00000507597 NTM-AS1Q6ZSK4 140 aa13.73□□□□□ -0.21
USP53-203ENST00000507597 WFDC10BQ8IUB3 73 aa13.73□□□□□ -0.21
USP53-203ENST00000507597 BTF3P20290 206 aaKnown RBP13.72□□□□□ -0.21
USP53-203ENST00000507597 G0S2P27469 103 aa13.72□□□□□ -0.21
USP53-203ENST00000507597 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
USP53-203ENST00000507597 IGLV2-18A0A075B6J9 118 aa13.71□□□□□ -0.21
USP53-203ENST00000507597 NBDYA0A0U1RRE5 68 aa13.71□□□□□ -0.21
USP53-203ENST00000507597 LOC389332A0A1B0GUA5 103 aa13.71□□□□□ -0.21
USP53-203ENST00000507597 NIT1Q86X76 327 aa13.71□□□□□ -0.21
USP53-203ENST00000507597 Q8N8P6 123 aa13.71□□□□□ -0.21
USP53-203ENST00000507597 PRSS3P2Q8NHM4 247 aa13.71□□□□□ -0.21
USP53-203ENST00000507597 COLCA2A8K830 154 aa13.7□□□□□ -0.22
USP53-203ENST00000507597 TSHBP01222 138 aa13.69□□□□□ -0.22
USP53-203ENST00000507597 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
USP53-203ENST00000507597 SCO1O75880 301 aa13.68□□□□□ -0.22
USP53-203ENST00000507597 RAB5BP61020 215 aa13.68□□□□□ -0.22
USP53-203ENST00000507597 GAGE6Q13070 117 aa13.68□□□□□ -0.22
USP53-203ENST00000507597 ORMDL2Q53FV1 153 aa13.68□□□□□ -0.22
USP53-203ENST00000507597 IGHV3-30P01768 117 aa13.67□□□□□ -0.22
USP53-203ENST00000507597 IGHV3-33P01772 117 aa13.67□□□□□ -0.22
USP53-203ENST00000507597 IGHV3-30-3P0DP02 117 aa13.67□□□□□ -0.22
USP53-203ENST00000507597 IGHV3-30-5P0DP03 117 aa13.67□□□□□ -0.22
USP53-203ENST00000507597 TMEM101Q96IK0 257 aa13.67□□□□□ -0.22
USP53-203ENST00000507597 A0A1B0GUV1 79 aa13.66□□□□□ -0.22
USP53-203ENST00000507597 ESDP10768 282 aa13.66□□□□□ -0.22
USP53-203ENST00000507597 ZNF25P17030 456 aaPredicted RBP13.66□□□□□ -0.22
USP53-203ENST00000507597 DEFB104AQ8WTQ1 72 aa13.66□□□□□ -0.22
USP53-203ENST00000507597 RYR3Q15413 4870 aa13.66□□□□□ -0.22
USP53-203ENST00000507597 LINC01549A6NIU2 74 aa13.65□□□□□ -0.22
USP53-203ENST00000507597 M0R2N4 97 aa13.65□□□□□ -0.22
USP53-203ENST00000507597 LAGE3Q14657 143 aa13.65□□□□□ -0.22
USP53-203ENST00000507597 DGAT2L7PQ6IED9 249 aa13.65□□□□□ -0.22
USP53-203ENST00000507597 FA2HQ7L5A8 372 aa13.65□□□□□ -0.22
USP53-203ENST00000507597 NFE4Q86UQ8 179 aa13.65□□□□□ -0.22
USP53-203ENST00000507597 TRGC2P03986 189 aa13.64□□□□□ -0.23
USP53-203ENST00000507597 IFI27P40305 119 aaPredicted RBP13.64□□□□□ -0.23
USP53-203ENST00000507597 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
USP53-203ENST00000507597 TRAV8-3A0A0A6YYJ7 113 aa13.63□□□□□ -0.23
USP53-203ENST00000507597 IBA57-AS1B1ANH7 110 aa13.63□□□□□ -0.23
USP53-203ENST00000507597 ANGP03950 147 aaKnown RBP13.63□□□□□ -0.23
USP53-203ENST00000507597 RBX1P62877 108 aa13.63□□□□□ -0.23
USP53-203ENST00000507597 Q0VG73 95 aa13.63□□□□□ -0.23
USP53-203ENST00000507597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.62□□□□□ -0.23
USP53-203ENST00000507597 IGKV2-29A2NJV5 120 aaPredicted RBP13.62□□□□□ -0.23
USP53-203ENST00000507597 CRPP02741 224 aa13.62□□□□□ -0.23
USP53-203ENST00000507597 FGF6P10767 208 aa13.62□□□□□ -0.23
USP53-203ENST00000507597 MPV17L2Q567V2 206 aa13.62□□□□□ -0.23
USP53-203ENST00000507597 Q6ZR54 194 aa13.62□□□□□ -0.23
USP53-203ENST00000507597 C20orf203Q8NBC4 194 aa13.62□□□□□ -0.23
USP53-203ENST00000507597 ALMS1Q8TCU4 4167 aa13.62□□□□□ -0.23
USP53-203ENST00000507597 C1orf134Q5TEV5 83 aa13.61□□□□□ -0.23
USP53-203ENST00000507597 MRPL52Q86TS9 123 aaKnown RBP13.61□□□□□ -0.23
USP53-203ENST00000507597 OR5A1Q8NGJ0 315 aa13.61□□□□□ -0.23
USP53-203ENST00000507597 C18orf32Q8TCD1 76 aa13.61□□□□□ -0.23
USP53-203ENST00000507597 RMI2Q96E14 147 aa13.61□□□□□ -0.23
USP53-203ENST00000507597 KLK12Q9UKR0 248 aa13.61□□□□□ -0.23
USP53-203ENST00000507597 C6orf223Q8N319 242 aa13.6□□□□□ -0.23
USP53-203ENST00000507597 TIMM21Q9BVV7 248 aa13.6□□□□□ -0.23
USP53-203ENST00000507597 CYSLTR1Q9Y271 337 aa13.6□□□□□ -0.23
USP53-203ENST00000507597 CSDC2Q9Y534 153 aaKnown RBP13.6□□□□□ -0.23
USP53-203ENST00000507597 LINC00614P0C842 121 aa13.59□□□□□ -0.23
USP53-203ENST00000507597 TM2D2Q9BX73 214 aa13.59□□□□□ -0.23
USP53-203ENST00000507597 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
USP53-203ENST00000507597 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
USP53-203ENST00000507597 Q8N976 141 aa13.58□□□□□ -0.24
USP53-203ENST00000507597 SPANXA1Q9NS26 97 aa13.58□□□□□ -0.24
USP53-203ENST00000507597 LYSTQ99698 3801 aa13.57□□□□□ -0.24
USP53-203ENST00000507597 LINC01546A6NGU7 62 aa13.57□□□□□ -0.24
USP53-203ENST00000507597 BAGE3Q86Y29 109 aa13.57□□□□□ -0.24
USP53-203ENST00000507597 UBE2WQ96B02 151 aa13.57□□□□□ -0.24
USP53-203ENST00000507597 MIAQ16674 131 aa13.56□□□□□ -0.24
USP53-203ENST00000507597 CHCHD1Q96BP2 118 aaKnown RBP13.56□□□□□ -0.24
USP53-203ENST00000507597 VPS13DQ5THJ4 4388 aa13.55□□□□□ -0.24
USP53-203ENST00000507597 TRAV8-4A0A0B4J246 113 aa13.55□□□□□ -0.24
USP53-203ENST00000507597 PAPPA-AS1Q5QFB9 102 aa13.55□□□□□ -0.24
USP53-203ENST00000507597 C2orf66Q6UXQ4 117 aa13.55□□□□□ -0.24
USP53-203ENST00000507597 LINC00269Q8N2A0 174 aa13.55□□□□□ -0.24
USP53-203ENST00000507597 UBE2D4Q9Y2X8 147 aa13.55□□□□□ -0.24
USP53-203ENST00000507597 PYGO1Q9Y3Y4 419 aa13.55□□□□□ -0.24
USP53-203ENST00000507597 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
USP53-203ENST00000507597 NPSP0C0P6 89 aa13.54□□□□□ -0.24
USP53-203ENST00000507597 REG3AQ06141 175 aa13.54□□□□□ -0.24
USP53-203ENST00000507597 ZNF664Q8N3J9 261 aa13.54□□□□□ -0.24
USP53-203ENST00000507597 Q8N3U1 123 aa13.53□□□□□ -0.24
USP53-203ENST00000507597 C1orf43Q9BWL3 253 aa13.53□□□□□ -0.24
USP53-203ENST00000507597 KRTAP1-5Q9BYS1 174 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 464.6 ms