RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 ATRAIDQ6UW56 229 aa8.87□□□□□ -0.99
DDR1-260ENST00000507533 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
DDR1-260ENST00000507533 TSKUQ8WUA8 353 aa8.87□□□□□ -0.99
DDR1-260ENST00000507533 LINC01600Q96MT4 127 aa8.87□□□□□ -0.99
DDR1-260ENST00000507533 GFRA4Q9GZZ7 299 aa8.87□□□□□ -0.99
DDR1-260ENST00000507533 KIF25-AS1Q9Y6Z4 181 aa8.87□□□□□ -0.99
DDR1-260ENST00000507533 V9GYV3 84 aa8.87□□□□□ -0.99
DDR1-260ENST00000507533 FAM231BA6NCW3 169 aa8.86□□□□□ -0.99
DDR1-260ENST00000507533 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
DDR1-260ENST00000507533 RAB4BP61018 213 aa8.86□□□□□ -0.99
DDR1-260ENST00000507533 ELOBQ15370 118 aa8.86□□□□□ -0.99
DDR1-260ENST00000507533 Q9UF83 564 aa8.86□□□□□ -0.99
DDR1-260ENST00000507533 A0A087WX48 190 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 TWIST1Q15672 202 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 ZNF56Q15929 161 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 DGAT2L7PQ6IED9 249 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 COMMD7Q86VX2 200 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 PGLYRP4Q96LB8 373 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 C1orf43Q9BWL3 253 aa8.85□□□□□ -0.99
DDR1-260ENST00000507533 LPAP08519 4548 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 LINC00862A6NCI5 91 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 HIGD1CA8MV81 97 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 F5H697 171 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 PRSS1P07477 247 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 Q0VG73 95 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 PNRC1Q12796 327 aaPredicted RBP8.84□□□□□ -0.99
DDR1-260ENST00000507533 KCNIP4Q6PIL6 250 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 SDIM1Q6ZPB5 146 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 BORCS7Q96B45 105 aa8.84□□□□□ -0.99
DDR1-260ENST00000507533 TMEM218A2RU14 115 aa8.83□□□□□ -1
DDR1-260ENST00000507533 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
DDR1-260ENST00000507533 A0A1B0GUT8 65 aa8.82□□□□□ -1
DDR1-260ENST00000507533 MGPP08493 103 aa8.82□□□□□ -1
DDR1-260ENST00000507533 RPL36AP83881 106 aaKnown RBP8.82□□□□□ -1
DDR1-260ENST00000507533 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
DDR1-260ENST00000507533 NUP35Q8NFH5 326 aa8.82□□□□□ -1
DDR1-260ENST00000507533 RPL36ALQ969Q0 106 aaKnown RBP8.82□□□□□ -1
DDR1-260ENST00000507533 DPH3Q96FX2 82 aa8.82□□□□□ -1
DDR1-260ENST00000507533 NAT8BQ9UHF3 227 aa8.82□□□□□ -1
DDR1-260ENST00000507533 KRTAP9-6A0A140TA67 174 aa8.81□□□□□ -1
DDR1-260ENST00000507533 SMIM27A0A1W2PRY6 76 aa8.81□□□□□ -1
DDR1-260ENST00000507533 F8W036 122 aa8.81□□□□□ -1
DDR1-260ENST00000507533 PPP1R2P9O14990 202 aa8.81□□□□□ -1
DDR1-260ENST00000507533 ENHOQ6UWT2 76 aa8.81□□□□□ -1
DDR1-260ENST00000507533 NEXN-AS1Q8NBZ9 246 aa8.81□□□□□ -1
DDR1-260ENST00000507533 TRBV7-3A0A075B6L6 115 aa8.8□□□□□ -1
DDR1-260ENST00000507533 A0A0J9YXV3 536 aa8.8□□□□□ -1
DDR1-260ENST00000507533 TMEM262E9PQX1 116 aa8.8□□□□□ -1
DDR1-260ENST00000507533 H7C1H1 209 aa8.8□□□□□ -1
DDR1-260ENST00000507533 M0QY20 66 aa8.8□□□□□ -1
DDR1-260ENST00000507533 HLA-DQA1P01909 254 aa8.8□□□□□ -1
DDR1-260ENST00000507533 ADCYAP1P18509 176 aa8.8□□□□□ -1
DDR1-260ENST00000507533 KRTAP10-8P60410 259 aa8.8□□□□□ -1
DDR1-260ENST00000507533 UBE2D3P61077 147 aa8.8□□□□□ -1
DDR1-260ENST00000507533 UBE2D2P62837 147 aa8.8□□□□□ -1
DDR1-260ENST00000507533 RIGQ13278 110 aa8.8□□□□□ -1
DDR1-260ENST00000507533 CIRBPQ14011 172 aaKnown RBP8.8□□□□□ -1
DDR1-260ENST00000507533 SUMO4Q6EEV6 95 aa8.8□□□□□ -1
DDR1-260ENST00000507533 SEC11CQ9BY50 192 aa8.8□□□□□ -1
DDR1-260ENST00000507533 PHOX2AO14813 284 aa8.79□□□□□ -1
DDR1-260ENST00000507533 CRPP02741 224 aa8.79□□□□□ -1
DDR1-260ENST00000507533 MT-ND4LP03901 98 aa8.79□□□□□ -1
DDR1-260ENST00000507533 ANAPC16Q96DE5 110 aa8.79□□□□□ -1
DDR1-260ENST00000507533 A0A087WYN8 130 aa8.78□□□□□ -1
DDR1-260ENST00000507533 RASL11AQ6T310 242 aa8.78□□□□□ -1
DDR1-260ENST00000507533 TMEM191AQ9H0A3 160 aa8.78□□□□□ -1
DDR1-260ENST00000507533 C7orf33Q8WU49 177 aa8.77□□□□□ -1.01
DDR1-260ENST00000507533 RNF185Q96GF1 192 aa8.77□□□□□ -1.01
DDR1-260ENST00000507533 FAT4Q6V0I7 4981 aa8.77□□□□□ -1.01
DDR1-260ENST00000507533 MUC2Q02817 5179 aa8.77□□□□□ -1.01
DDR1-260ENST00000507533 A0A1B0GW15 77 aa8.76□□□□□ -1.01
DDR1-260ENST00000507533 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
DDR1-260ENST00000507533 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.76□□□□□ -1.01
DDR1-260ENST00000507533 GATD1Q8NB37 220 aa8.76□□□□□ -1.01
DDR1-260ENST00000507533 NIT2Q9NQR4 276 aa8.76□□□□□ -1.01
DDR1-260ENST00000507533 ANGP03950 147 aaKnown RBP8.75□□□□□ -1.01
DDR1-260ENST00000507533 CHTF8P0CG12 524 aa8.75□□□□□ -1.01
DDR1-260ENST00000507533 IGHV3-64A0A075B6Q5 118 aa8.74□□□□□ -1.01
DDR1-260ENST00000507533 TRAV26-2A0A0B4J265 109 aa8.74□□□□□ -1.01
DDR1-260ENST00000507533 RAB4AP20338 218 aa8.74□□□□□ -1.01
DDR1-260ENST00000507533 MRPL54Q6P161 138 aaKnown RBP8.74□□□□□ -1.01
DDR1-260ENST00000507533 SPACA4Q8TDM5 124 aa8.74□□□□□ -1.01
DDR1-260ENST00000507533 CTDSP1Q9GZU7 261 aa8.74□□□□□ -1.01
DDR1-260ENST00000507533 CARHSP1Q9Y2V2 147 aaKnown RBP8.74□□□□□ -1.01
DDR1-260ENST00000507533 A0A1B0GXF2 115 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 S100A8P05109 93 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 CAMPP49913 170 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
DDR1-260ENST00000507533 MIAQ16674 131 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 MPV17L2Q567V2 206 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 TMEM97Q5BJF2 176 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 REG3GQ6UW15 175 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 CLRN3Q8NCR9 226 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
DDR1-260ENST00000507533 TRBV6-8A0A0A6YYG3 113 aa8.72□□□□□ -1.01
DDR1-260ENST00000507533 HBBP68871 147 aa8.72□□□□□ -1.01
DDR1-260ENST00000507533 PRR3P79522 188 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms