RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 HLA-DRB4X5D2U9 266 aa4.15□□□□□ -1.75
SCLT1-207ENST00000506233 GAGE5Q13069 117 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 GAGE6Q13070 117 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 OR11H1Q8NG94 326 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 NBEAL1Q6ZS30 2694 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 TLN2Q9Y4G6 2542 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 IGHV1OR15-1A0A075B7D0 117 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 TRAV2A0A0B4J234 112 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 A0A1B0GV90 55 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 ZC2HC1BQ5TFG8 222 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 PMCHL2Q9BQD1 86 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 MIEN1Q9BRT3 115 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 OR4C46A6NHA9 309 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 KNCNA6PVL3 124 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 H3BVH4 76 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 J3QKU1 62 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 TTTY13Q9BZ97 58 aa4.14□□□□□ -1.75
SCLT1-207ENST00000506233 IGLV1-51P01701 117 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 TSPEAR-AS2P59090 65 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 RPL32P62910 135 aaKnown RBP4.13□□□□□ -1.75
SCLT1-207ENST00000506233 K7EQD1 137 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 CD7P09564 240 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 SBSPONQ8IVN8 264 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 MTURNQ8N3F0 131 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 CHCHD10Q8WYQ3 142 aaPredicted RBP4.13□□□□□ -1.75
SCLT1-207ENST00000506233 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 TRBV27A0A0K0K1C4 114 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 C6orf223Q8N319 242 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 OR2K2Q8NGT1 345 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 ZNRF2Q8NHG8 242 aa4.13□□□□□ -1.75
SCLT1-207ENST00000506233 SONP18583 2426 aaKnown RBP4.12□□□□□ -1.75
SCLT1-207ENST00000506233 TRBV6-5A0A0K0K1A5 114 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 ZNF688P0C7X2 276 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 TSPOP30536 169 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 RNASE4P34096 147 aaKnown RBP4.12□□□□□ -1.75
SCLT1-207ENST00000506233 PRSS3P2Q8NHM4 247 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 TCAPO15273 167 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 TCF21O43680 179 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 NUTF2P61970 127 aaKnown RBP4.12□□□□□ -1.75
SCLT1-207ENST00000506233 NTM-AS1Q6ZSK4 140 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 NEGR1Q7Z3B1 354 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 Q8N8P6 123 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 CHCHD7Q9BUK0 85 aa4.12□□□□□ -1.75
SCLT1-207ENST00000506233 KMT2CQ8NEZ4 4911 aaKnown RBP4.12□□□□□ -1.75
SCLT1-207ENST00000506233 LINC01619G3V211 115 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 PRELID3AQ96N28 172 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 C7orf71A4D174 169 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 K7EP13 123 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 RIPPLY3P57055 190 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 TWIST1Q15672 202 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 SPINK13Q1W4C9 94 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 ZNF705AQ6ZN79 300 aaPredicted RBP4.11□□□□□ -1.75
SCLT1-207ENST00000506233 TRAV9-2A0A087WT02 112 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 TRAV12-3A0A0B4J271 114 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 LGALS9BQ3B8N2 356 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 PSMG4Q5JS54 123 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 CFAP126Q5VTH2 177 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 LGALS9CQ6DKI2 356 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 Q6ZN92 141 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 FOXI2Q6ZQN5 318 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 PCP2Q8IVA1 136 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 ORMDL3Q8N138 153 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 C14orf178Q8N769 122 aaPredicted RBP4.11□□□□□ -1.75
SCLT1-207ENST00000506233 LITAFQ99732 161 aa4.11□□□□□ -1.75
SCLT1-207ENST00000506233 M0R381 172 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 SPATA45Q537H7 98 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 BAGE3Q86Y29 109 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 OR1N2Q8NGR9 330 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 MPLKIPQ8TAP9 179 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 LOC389332A0A1B0GUA5 103 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 TAX1BP3O14907 124 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 REG3AQ06141 175 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 ZFP2Q6ZN57 461 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 UFC1Q9Y3C8 167 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 IGKV3-7A0A075B6H7 116 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 IGHV3OR16-12A0A075B7B8 117 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 TINCRA0A1B0GVN0 87 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 FCER1GP30273 86 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 RPL39P62891 51 aaKnown RBP4.1□□□□□ -1.75
SCLT1-207ENST00000506233 TMEM70Q9BUB7 260 aa4.1□□□□□ -1.75
SCLT1-207ENST00000506233 MTORP42345 2549 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 JMJD1CQ15652 2540 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 S100A2P29034 98 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 PRIMA1Q86XR5 153 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 DEFB104AQ8WTQ1 72 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 TMEM158Q8WZ71 300 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 OPRPNQ99935 248 aaPredicted RBP4.09□□□□□ -1.75
SCLT1-207ENST00000506233 GOLT1BQ9Y3E0 138 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 PYGO1Q9Y3Y4 419 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 KRTDAPP60985 99 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 SMIM2Q9BVW6 85 aa4.09□□□□□ -1.75
SCLT1-207ENST00000506233 LRP1BQ9NZR2 4599 aa4.09□□□□□ -1.76
SCLT1-207ENST00000506233 PRSS2P07478 247 aa4.09□□□□□ -1.76
SCLT1-207ENST00000506233 COX8AP10176 69 aa4.09□□□□□ -1.76
SCLT1-207ENST00000506233 KRTAP10-11P60412 298 aa4.09□□□□□ -1.76
SCLT1-207ENST00000506233 RPS20P60866 119 aaKnown RBP4.09□□□□□ -1.76
SCLT1-207ENST00000506233 TMEM78Q5T7P6 136 aa4.09□□□□□ -1.76
SCLT1-207ENST00000506233 FAM19A3Q7Z5A8 133 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms