RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PRSS2P07478 247 aa8.68□□□□□ -1.02
UBE3D-206ENST00000505226 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
UBE3D-206ENST00000505226 NHLRC4P0CG21 123 aaPredicted RBP8.68□□□□□ -1.02
UBE3D-206ENST00000505226 AKAP9Q99996 3911 aa8.68□□□□□ -1.02
UBE3D-206ENST00000505226 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
UBE3D-206ENST00000505226 TRBV30A0A0K0K1B3 111 aa8.67□□□□□ -1.02
UBE3D-206ENST00000505226 CCL19Q99731 98 aa8.67□□□□□ -1.02
UBE3D-206ENST00000505226 PYGO1Q9Y3Y4 419 aa8.67□□□□□ -1.02
UBE3D-206ENST00000505226 USP9YO00507 2555 aaPredicted RBP8.67□□□□□ -1.02
UBE3D-206ENST00000505226 TMEM262E9PQX1 116 aa8.67□□□□□ -1.02
UBE3D-206ENST00000505226 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
UBE3D-206ENST00000505226 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
UBE3D-206ENST00000505226 ZFAND6Q6FIF0 208 aa8.66□□□□□ -1.02
UBE3D-206ENST00000505226 CHCHD7Q9BUK0 85 aa8.66□□□□□ -1.02
UBE3D-206ENST00000505226 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
UBE3D-206ENST00000505226 ATP5J2P56134 94 aa8.66□□□□□ -1.02
UBE3D-206ENST00000505226 NDUFA12Q9UI09 145 aa8.66□□□□□ -1.02
UBE3D-206ENST00000505226 RBMY1BA6NDE4 496 aaKnown RBP8.65□□□□□ -1.02
UBE3D-206ENST00000505226 RBMY1EA6NEQ0 496 aaKnown RBP8.65□□□□□ -1.02
UBE3D-206ENST00000505226 RBMY1DP0C7P1 496 aaKnown RBP8.65□□□□□ -1.02
UBE3D-206ENST00000505226 VSIG2Q96IQ7 327 aa8.65□□□□□ -1.02
UBE3D-206ENST00000505226 USP9XQ93008 2570 aaPredicted RBP8.65□□□□□ -1.02
UBE3D-206ENST00000505226 FBN2P35556 2912 aa8.65□□□□□ -1.02
UBE3D-206ENST00000505226 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
UBE3D-206ENST00000505226 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
UBE3D-206ENST00000505226 H7C423 109 aa8.65□□□□□ -1.02
UBE3D-206ENST00000505226 LINC01600Q96MT4 127 aa8.65□□□□□ -1.02
UBE3D-206ENST00000505226 ANAPC13Q9BS18 74 aa8.65□□□□□ -1.02
UBE3D-206ENST00000505226 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.03
UBE3D-206ENST00000505226 TEX29Q8N6K0 151 aa8.65□□□□□ -1.03
UBE3D-206ENST00000505226 RNF152Q8N8N0 203 aa8.65□□□□□ -1.03
UBE3D-206ENST00000505226 DAND5Q8N907 189 aa8.65□□□□□ -1.03
UBE3D-206ENST00000505226 CLEC2BQ92478 149 aa8.65□□□□□ -1.03
UBE3D-206ENST00000505226 ICOSQ9Y6W8 199 aa8.65□□□□□ -1.03
UBE3D-206ENST00000505226 CENPEQ02224 2701 aa8.64□□□□□ -1.03
UBE3D-206ENST00000505226 TRGV11A0A075B6L2 103 aa8.64□□□□□ -1.03
UBE3D-206ENST00000505226 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.64□□□□□ -1.03
UBE3D-206ENST00000505226 NRGNQ92686 78 aa8.64□□□□□ -1.03
UBE3D-206ENST00000505226 UBE2D4Q9Y2X8 147 aa8.64□□□□□ -1.03
UBE3D-206ENST00000505226 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
UBE3D-206ENST00000505226 EDA2RQ9HAV5 297 aa8.64□□□□□ -1.03
UBE3D-206ENST00000505226 IGHV3-38A0A0C4DH36 116 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
UBE3D-206ENST00000505226 C18orf65Q6ZTR6 163 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 LINC00467Q9BRT7 94 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 SPANXDQ9BXN6 97 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 SPANXCQ9NY87 97 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 POLQO75417 2590 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 MIAQ16674 131 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 TNFRSF18Q9Y5U5 241 aa8.63□□□□□ -1.03
UBE3D-206ENST00000505226 TINCRA0A1B0GVN0 87 aa8.62□□□□□ -1.03
UBE3D-206ENST00000505226 DEFB131AP59861 70 aa8.62□□□□□ -1.03
UBE3D-206ENST00000505226 DEFB136Q30KP8 78 aa8.62□□□□□ -1.03
UBE3D-206ENST00000505226 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
UBE3D-206ENST00000505226 TMEM61Q8N0U2 210 aa8.61□□□□□ -1.03
UBE3D-206ENST00000505226 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
UBE3D-206ENST00000505226 NIPBLQ6KC79 2804 aaeCLIP8.61□□□□□ -1.03
UBE3D-206ENST00000505226 HIST2H2BDQ6DRA6 164 aa8.61□□□□□ -1.03
UBE3D-206ENST00000505226 MAPK1IP1LQ8NDC0 245 aa8.61□□□□□ -1.03
UBE3D-206ENST00000505226 NBPF19A0A087WUL8 3843 aa8.61□□□□□ -1.03
UBE3D-206ENST00000505226 B4DSR2 109 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 H3BMM0 161 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 NDUFV3P56181 108 aaKnown RBP8.6□□□□□ -1.03
UBE3D-206ENST00000505226 COX6A2Q02221 97 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 GAGE2EQ4V326 116 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 GAGE2DQ9UEU5 116 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 TRAV8-4A0A0B4J246 113 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 SNCGO76070 127 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 SLURP1P55000 103 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 DUX3Q96PT4 197 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 CITED2Q99967 270 aaPredicted RBP8.6□□□□□ -1.03
UBE3D-206ENST00000505226 SS18L2Q9UHA2 77 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 PKD1L2Q7Z442 2459 aa8.6□□□□□ -1.03
UBE3D-206ENST00000505226 C15orf53Q8NAA6 179 aa8.59□□□□□ -1.03
UBE3D-206ENST00000505226 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
UBE3D-206ENST00000505226 SPANXA1Q9NS26 97 aa8.59□□□□□ -1.03
UBE3D-206ENST00000505226 TEX15Q9BXT5 2789 aa8.59□□□□□ -1.03
UBE3D-206ENST00000505226 DOPEY1Q5JWR5 2465 aa8.59□□□□□ -1.03
UBE3D-206ENST00000505226 CHD6Q8TD26 2715 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 B5MCH6 92 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 C11orf72Q8NBR9 251 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 LST1O00453 97 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 ZNF469Q96JG9 3925 aaPredicted RBP8.58□□□□□ -1.04
UBE3D-206ENST00000505226 A8MTW9 85 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 NDUFA7O95182 113 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 TTC32Q5I0X7 151 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 CFAP161Q6P656 301 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 ZNF702PQ9H963 129 aa8.58□□□□□ -1.04
UBE3D-206ENST00000505226 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
UBE3D-206ENST00000505226 GAGE5Q13069 117 aa8.57□□□□□ -1.04
UBE3D-206ENST00000505226 GAGE6Q13070 117 aa8.57□□□□□ -1.04
UBE3D-206ENST00000505226 ZNF625Q96I27 306 aaPredicted RBP8.57□□□□□ -1.04
UBE3D-206ENST00000505226 PRORYQ9H606 182 aa8.57□□□□□ -1.04
UBE3D-206ENST00000505226 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 A0A0U1RRA0 63 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 MYO9AB2RTY4 2548 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms