RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 UBE2E2Q96LR5 201 aa11.7□□□□□ -0.54
DDX41-205ENST00000505081 ZNF469Q96JG9 3925 aaPredicted RBP11.7□□□□□ -0.54
DDX41-205ENST00000505081 ELANEP08246 267 aa11.7□□□□□ -0.54
DDX41-205ENST00000505081 AKAP9Q99996 3911 aa11.69□□□□□ -0.54
DDX41-205ENST00000505081 NF1P21359 2839 aa11.69□□□□□ -0.54
DDX41-205ENST00000505081 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
DDX41-205ENST00000505081 IGHV3-30-3P0DP02 117 aa11.69□□□□□ -0.54
DDX41-205ENST00000505081 CDIP1Q9H305 208 aa11.69□□□□□ -0.54
DDX41-205ENST00000505081 WNK1Q9H4A3 2382 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 H3BMM0 161 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 TMEM61Q8N0U2 210 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 TMEM263Q8WUH6 116 aaKnown RBP11.68□□□□□ -0.54
DDX41-205ENST00000505081 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
DDX41-205ENST00000505081 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
DDX41-205ENST00000505081 A0A0J9YXY3 114 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
DDX41-205ENST00000505081 IGHV3-33P01772 117 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 DSCR9P59020 149 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 Q6YL49 198 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 TNFRSF18Q9Y5U5 241 aa11.68□□□□□ -0.54
DDX41-205ENST00000505081 NIPBLQ6KC79 2804 aaeCLIP11.67□□□□□ -0.54
DDX41-205ENST00000505081 KHDC1LQ5JSQ8 128 aa11.67□□□□□ -0.54
DDX41-205ENST00000505081 PRB1P04280 392 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 NPC2P61916 151 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 ATP6V0E2Q8NHE4 81 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 TIMM21Q9BVV7 248 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 SETD2Q9BYW2 2564 aaPredicted RBP11.66□□□□□ -0.54
DDX41-205ENST00000505081 LYRM7Q5U5X0 104 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 ANKRD29Q8N6D5 301 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 M0R2P5 195 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 TEN1Q86WV5 123 aa11.66□□□□□ -0.54
DDX41-205ENST00000505081 ADAMTSL4-AS1Q5T5F5 129 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 RNF152Q8N8N0 203 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 ERG28Q9UKR5 140 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 TRBV20-1A0A075B6N2 111 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 A8MWV9 139 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 PRSS2P07478 247 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 Q1RN00 199 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.54
DDX41-205ENST00000505081 C9JAW5 83 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 SPINK8P0C7L1 97 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 KRTAP10-9P60411 292 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 MT-ATP8P03928 68 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 SCGB1A1P11684 91 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 Q6ZSV7 163 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 PPDPFLQ8WWR9 84 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 LITAFQ99732 161 aa11.64□□□□□ -0.55
DDX41-205ENST00000505081 J3QLI3 93 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 IGHV4-31P0DP07 118 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 CR1P17927 2039 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
DDX41-205ENST00000505081 LINC01587Q99440 93 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 LINC00467Q9BRT7 94 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 PYGO1Q9Y3Y4 419 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 Q6ZUT4 128 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
DDX41-205ENST00000505081 C2CD3Q4AC94 2353 aa11.62□□□□□ -0.55
DDX41-205ENST00000505081 FSHBP01225 129 aa11.62□□□□□ -0.55
DDX41-205ENST00000505081 XGP55808 180 aa11.62□□□□□ -0.55
DDX41-205ENST00000505081 MAP6D1Q9H9H5 199 aa11.62□□□□□ -0.55
DDX41-205ENST00000505081 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
DDX41-205ENST00000505081 SLC25A20O43772 301 aa11.62□□□□□ -0.55
DDX41-205ENST00000505081 A0A0B4J2C4 111 aa11.61□□□□□ -0.55
DDX41-205ENST00000505081 NDUFA12Q9UI09 145 aa11.61□□□□□ -0.55
DDX41-205ENST00000505081 ZNF415Q09FC8 603 aa11.61□□□□□ -0.55
DDX41-205ENST00000505081 Q5PR19 223 aa11.61□□□□□ -0.55
DDX41-205ENST00000505081 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
DDX41-205ENST00000505081 C11orf72Q8NBR9 251 aa11.6□□□□□ -0.55
DDX41-205ENST00000505081 EDA2RQ9HAV5 297 aa11.6□□□□□ -0.55
DDX41-205ENST00000505081 USP24Q9UPU5 2620 aa11.6□□□□□ -0.55
DDX41-205ENST00000505081 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
DDX41-205ENST00000505081 IGHV3OR16-12A0A075B7B8 117 aa11.6□□□□□ -0.55
DDX41-205ENST00000505081 DAND5Q8N907 189 aa11.59□□□□□ -0.55
DDX41-205ENST00000505081 A8MTW9 85 aa11.59□□□□□ -0.55
DDX41-205ENST00000505081 C11orf44Q8N8P7 122 aa11.59□□□□□ -0.55
DDX41-205ENST00000505081 DYNLRB2Q8TF09 96 aa11.59□□□□□ -0.55
DDX41-205ENST00000505081 XCL2Q9UBD3 114 aa11.59□□□□□ -0.55
DDX41-205ENST00000505081 TRIAP1O43715 76 aa11.59□□□□□ -0.55
DDX41-205ENST00000505081 VSIG2Q96IQ7 327 aa11.59□□□□□ -0.55
DDX41-205ENST00000505081 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.58□□□□□ -0.56
DDX41-205ENST00000505081 NBPF19A0A087WUL8 3843 aa11.58□□□□□ -0.56
DDX41-205ENST00000505081 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.58□□□□□ -0.56
DDX41-205ENST00000505081 CRYBA4P53673 196 aa11.57□□□□□ -0.56
DDX41-205ENST00000505081 CDKN2A-AS1Q9UH64 79 aa11.57□□□□□ -0.56
DDX41-205ENST00000505081 CCDC168Q8NDH2 2452 aa11.57□□□□□ -0.56
DDX41-205ENST00000505081 TINCRA0A1B0GVN0 87 aa11.57□□□□□ -0.56
DDX41-205ENST00000505081 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
DDX41-205ENST00000505081 UBR5O95071 2799 aaPredicted RBP11.56□□□□□ -0.56
DDX41-205ENST00000505081 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
DDX41-205ENST00000505081 CKS1BP61024 79 aa11.56□□□□□ -0.56
DDX41-205ENST00000505081 PEMTQ9UBM1 199 aa11.56□□□□□ -0.56
DDX41-205ENST00000505081 NDUFA7O95182 113 aa11.56□□□□□ -0.56
DDX41-205ENST00000505081 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
DDX41-205ENST00000505081 GEMIN7Q9H840 131 aaKnown RBP11.56□□□□□ -0.56
DDX41-205ENST00000505081 SPANXA1Q9NS26 97 aa11.56□□□□□ -0.56
DDX41-205ENST00000505081 APCP25054 2843 aa11.55□□□□□ -0.56
DDX41-205ENST00000505081 COX6A2Q02221 97 aa11.55□□□□□ -0.56
DDX41-205ENST00000505081 LINC01620Q4KN68 170 aa11.55□□□□□ -0.56
DDX41-205ENST00000505081 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms