RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 RAB4BP61018 213 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 TMEM136Q6ZRR5 245 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 OR10AG1Q8NH19 301 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 F2Z2F3 143 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 CTRLP40313 264 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 UBE2D3P61077 147 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 UBE2D2P62837 147 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 DAZ4Q86SG3 579 aaKnown RBP9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 Q8N814 137 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 FER1L6-AS1Q8NA97 138 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 Q9HAA7 133 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 DAZ3Q9NR90 486 aaKnown RBP9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
PDLIM7-211ENST00000504318 TRBV10-1A0A0K0K1A3 114 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 C5orf52A6NGY3 159 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 APCSP02743 223 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 OR5AL1P0C617 328 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 GZMBP10144 247 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 NDUFA6P56556 154 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 NIT1Q86X76 327 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 DNAJC30Q96LL9 226 aa9.27□□□□□ -0.93
PDLIM7-211ENST00000504318 SNRPEP62304 92 aaKnown RBP9.26□□□□□ -0.93
PDLIM7-211ENST00000504318 COA6Q5JTJ3 125 aaKnown RBP9.26□□□□□ -0.93
PDLIM7-211ENST00000504318 GATD1Q8NB37 220 aa9.26□□□□□ -0.93
PDLIM7-211ENST00000504318 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
PDLIM7-211ENST00000504318 TPPP3Q9BW30 176 aa9.26□□□□□ -0.93
PDLIM7-211ENST00000504318 IGLC6P0CF74 106 aa9.25□□□□□ -0.93
PDLIM7-211ENST00000504318 GCSHP23434 173 aa9.25□□□□□ -0.93
PDLIM7-211ENST00000504318 CAMPP49913 170 aa9.25□□□□□ -0.93
PDLIM7-211ENST00000504318 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
PDLIM7-211ENST00000504318 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
PDLIM7-211ENST00000504318 CACNG7P62955 275 aa9.24□□□□□ -0.93
PDLIM7-211ENST00000504318 LYZL1Q6UWQ5 148 aa9.24□□□□□ -0.93
PDLIM7-211ENST00000504318 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
PDLIM7-211ENST00000504318 FAM30AQ9NZY2 134 aa9.24□□□□□ -0.93
PDLIM7-211ENST00000504318 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
PDLIM7-211ENST00000504318 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
PDLIM7-211ENST00000504318 PSCAO43653 123 aa9.23□□□□□ -0.93
PDLIM7-211ENST00000504318 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
PDLIM7-211ENST00000504318 TRAV8-3A0A0A6YYJ7 113 aa9.22□□□□□ -0.93
PDLIM7-211ENST00000504318 S100A2P29034 98 aa9.22□□□□□ -0.93
PDLIM7-211ENST00000504318 Q0VG73 95 aa9.22□□□□□ -0.93
PDLIM7-211ENST00000504318 Q6ZSA8 131 aa9.22□□□□□ -0.93
PDLIM7-211ENST00000504318 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
PDLIM7-211ENST00000504318 HAMPP81172 84 aa9.21□□□□□ -0.94
PDLIM7-211ENST00000504318 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.94
PDLIM7-211ENST00000504318 NTM-AS1Q6ZSK4 140 aa9.21□□□□□ -0.94
PDLIM7-211ENST00000504318 SMIM15Q7Z3B0 74 aa9.21□□□□□ -0.94
PDLIM7-211ENST00000504318 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.94
PDLIM7-211ENST00000504318 TMEM70Q9BUB7 260 aa9.21□□□□□ -0.94
PDLIM7-211ENST00000504318 TM2D2Q9BX73 214 aa9.21□□□□□ -0.94
PDLIM7-211ENST00000504318 MYCBP2O75592 4640 aa9.2□□□□□ -0.94
PDLIM7-211ENST00000504318 TRBV6-8A0A0A6YYG3 113 aa9.2□□□□□ -0.94
PDLIM7-211ENST00000504318 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
PDLIM7-211ENST00000504318 TWIST1Q15672 202 aa9.2□□□□□ -0.94
PDLIM7-211ENST00000504318 Q5VSD8 79 aa9.2□□□□□ -0.94
PDLIM7-211ENST00000504318 ZNF56Q15929 161 aa9.19□□□□□ -0.94
PDLIM7-211ENST00000504318 BAGE3Q86Y29 109 aa9.19□□□□□ -0.94
PDLIM7-211ENST00000504318 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
PDLIM7-211ENST00000504318 TMEM191AQ9H0A3 160 aa9.19□□□□□ -0.94
PDLIM7-211ENST00000504318 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
PDLIM7-211ENST00000504318 LECT2O14960 151 aa9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 NTF3P20783 257 aa9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 AKR1D1P51857 326 aa9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 ENHOQ6UWT2 76 aa9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 ALKBH7Q9BT30 221 aaPredicted RBP9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 SRRM2Q9UQ35 2752 aaKnown RBP9.18□□□□□ -0.94
PDLIM7-211ENST00000504318 M0QY20 66 aa9.17□□□□□ -0.94
PDLIM7-211ENST00000504318 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
PDLIM7-211ENST00000504318 MPV17L2Q567V2 206 aa9.17□□□□□ -0.94
PDLIM7-211ENST00000504318 FAM104BQ5XKR9 115 aa9.17□□□□□ -0.94
PDLIM7-211ENST00000504318 TMEM18Q96B42 140 aa9.17□□□□□ -0.94
PDLIM7-211ENST00000504318 FLG2Q5D862 2391 aaPredicted RBP9.17□□□□□ -0.94
PDLIM7-211ENST00000504318 PPBPP02775 128 aa9.16□□□□□ -0.94
PDLIM7-211ENST00000504318 ESDP10768 282 aa9.16□□□□□ -0.94
PDLIM7-211ENST00000504318 KRTAP26-1Q6PEX3 210 aa9.16□□□□□ -0.94
PDLIM7-211ENST00000504318 AP1S3Q96PC3 154 aa9.16□□□□□ -0.94
PDLIM7-211ENST00000504318 COX11Q9Y6N1 276 aa9.16□□□□□ -0.94
PDLIM7-211ENST00000504318 SSTP61278 116 aa9.15□□□□□ -0.94
PDLIM7-211ENST00000504318 ORMDL3Q8N138 153 aa9.15□□□□□ -0.94
PDLIM7-211ENST00000504318 C18orf32Q8TCD1 76 aa9.15□□□□□ -0.94
PDLIM7-211ENST00000504318 UBE2WQ96B02 151 aa9.15□□□□□ -0.94
PDLIM7-211ENST00000504318 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
PDLIM7-211ENST00000504318 LAMTOR2Q9Y2Q5 125 aa9.15□□□□□ -0.94
PDLIM7-211ENST00000504318 HERC1Q15751 4861 aa9.15□□□□□ -0.95
PDLIM7-211ENST00000504318 IGKV2D-24A0A075B6R9 120 aa9.14□□□□□ -0.95
PDLIM7-211ENST00000504318 A0A087WX48 190 aa9.14□□□□□ -0.95
PDLIM7-211ENST00000504318 SERF1AO75920 110 aa9.14□□□□□ -0.95
PDLIM7-211ENST00000504318 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
PDLIM7-211ENST00000504318 Q8N976 141 aa9.14□□□□□ -0.95
PDLIM7-211ENST00000504318 HIST1H2BLQ99880 126 aa9.14□□□□□ -0.95
PDLIM7-211ENST00000504318 PRR34Q9NV39 138 aa9.14□□□□□ -0.95
PDLIM7-211ENST00000504318 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.13□□□□□ -0.95
PDLIM7-211ENST00000504318 SMIM6P0DI80 62 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms