RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 MRPL16Q9NX20 251 aaKnown RBP7.07□□□□□ -1.28
COL1A1-210ENST00000504289 NACAE9PAV3 2078 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 IGLV4-69A0A075B6H9 119 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 TRBV25-1A0A075B6N4 114 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 MYMXA0A1B0GTQ4 84 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
COL1A1-210ENST00000504289 RRN3P1Q2M238 152 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 HIST2H2BDQ6DRA6 164 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 DAZ4Q86SG3 579 aaKnown RBP7.06□□□□□ -1.28
COL1A1-210ENST00000504289 AMELXQ99217 191 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 CITED1Q99966 193 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 TM2D2Q9BX73 214 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 VCX2Q9H322 139 aa7.06□□□□□ -1.28
COL1A1-210ENST00000504289 DAZ3Q9NR90 486 aaKnown RBP7.06□□□□□ -1.28
COL1A1-210ENST00000504289 TRBV7-3A0A075B6L6 115 aa7.05□□□□□ -1.28
COL1A1-210ENST00000504289 TRGV1A0A0A0MS02 117 aa7.05□□□□□ -1.28
COL1A1-210ENST00000504289 H3BRM9 83 aa7.05□□□□□ -1.28
COL1A1-210ENST00000504289 K7EP13 123 aa7.05□□□□□ -1.28
COL1A1-210ENST00000504289 WIPF1O43516 503 aa7.05□□□□□ -1.28
COL1A1-210ENST00000504289 MRPS36P82909 103 aaKnown RBP7.05□□□□□ -1.28
COL1A1-210ENST00000504289 RPL36AP83881 106 aaKnown RBP7.05□□□□□ -1.28
COL1A1-210ENST00000504289 KIR2DL5BQ8NHK3 375 aa7.05□□□□□ -1.28
COL1A1-210ENST00000504289 RPL36ALQ969Q0 106 aaKnown RBP7.05□□□□□ -1.28
COL1A1-210ENST00000504289 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
COL1A1-210ENST00000504289 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 IGHV3OR16-12A0A075B7B8 117 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 TRBV6-4A0A1B0GX49 114 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 K7EQD1 137 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 TAX1BP3O14907 124 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 Q6ZSN1 163 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 WFDC9Q8NEX5 89 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 PRADC1Q9BSG0 188 aa7.04□□□□□ -1.28
COL1A1-210ENST00000504289 CSDC2Q9Y534 153 aaKnown RBP7.04□□□□□ -1.28
COL1A1-210ENST00000504289 NIPBLQ6KC79 2804 aaeCLIP7.04□□□□□ -1.28
COL1A1-210ENST00000504289 IGHV3-73A0A0B4J1V6 119 aa7.03□□□□□ -1.28
COL1A1-210ENST00000504289 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
COL1A1-210ENST00000504289 PLAC8L1A1L4L8 177 aa7.03□□□□□ -1.28
COL1A1-210ENST00000504289 H7C423 109 aa7.03□□□□□ -1.28
COL1A1-210ENST00000504289 CHCHD7Q9BUK0 85 aa7.03□□□□□ -1.28
COL1A1-210ENST00000504289 GTSF1LQ9H1H1 148 aa7.03□□□□□ -1.28
COL1A1-210ENST00000504289 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
COL1A1-210ENST00000504289 FN1P02751 2386 aaKnown RBP7.03□□□□□ -1.28
COL1A1-210ENST00000504289 JMJD1CQ15652 2540 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 PRM2P04554 102 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 RPL35AP18077 110 aaKnown RBP7.02□□□□□ -1.29
COL1A1-210ENST00000504289 UBE2D3P61077 147 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 UBE2D2P62837 147 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 RBX1P62877 108 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 UBE2V1Q13404 147 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 C21orf62-AS1Q17RA5 79 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 Q6ZTI0 123 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 CEND1Q8N111 149 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 LINC00612Q8N6U2 182 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 PLEKHB2Q96CS7 222 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 NOP10Q9NPE3 64 aaKnown RBP7.02□□□□□ -1.29
COL1A1-210ENST00000504289 UBE2D4Q9Y2X8 147 aa7.02□□□□□ -1.29
COL1A1-210ENST00000504289 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 C9orf118A6NHY6 69 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 LEPROTO15243 131 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 TMEM170BQ5T4T1 132 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 MAPKAPK5-AS1Q8N8E1 139 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 ZNF479Q96JC4 524 aa7.01□□□□□ -1.29
COL1A1-210ENST00000504289 TRGV2A0A075B6R0 118 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 A6NJY4 79 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 ZNF815PA8K554 130 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 SMIM13P0DJ93 91 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 APOC4P55056 127 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 TIRAPP58753 221 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 FAM19A3Q7Z5A8 133 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
COL1A1-210ENST00000504289 SPANXB1Q9NS25 103 aaPredicted RBP7□□□□□ -1.29
COL1A1-210ENST00000504289 FBN3Q75N90 2809 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 A0A1B0GWB2 263 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 LYRM9A8MSI8 78 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 J3QQQ9 107 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 ZNF22P17026 224 aaPredicted RBP6.99□□□□□ -1.29
COL1A1-210ENST00000504289 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
COL1A1-210ENST00000504289 GCSHP23434 173 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 PTTG1IPP53801 180 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 TCTAP57738 103 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 VAMP3Q15836 100 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 DGAT2L7PQ6IED9 249 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.99□□□□□ -1.29
COL1A1-210ENST00000504289 FAM104AQ969W3 186 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 HIST1H4GQ99525 98 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 WFDC10AQ9H1F0 79 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
COL1A1-210ENST00000504289 IGLV5-45A0A087WSX0 123 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 GAGE12BA1L429 117 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 GAGE7O76087 117 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 GAGE12FP0CL80 117 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 GAGE12GP0CL81 117 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 GAGE12IP0CL82 117 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 SCGB1D4Q6XE38 83 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 SBSPONQ8IVN8 264 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 OR5A1Q8NGJ0 315 aa6.98□□□□□ -1.29
COL1A1-210ENST00000504289 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms