RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 MRPL16Q9NX20 251 aaKnown RBP9.44□□□□□ -0.9
MATR3-233ENST00000504203 XCL2Q9UBD3 114 aa9.44□□□□□ -0.9
MATR3-233ENST00000504203 RS1O15537 224 aa9.44□□□□□ -0.9
MATR3-233ENST00000504203 ZNF22P17026 224 aaPredicted RBP9.44□□□□□ -0.9
MATR3-233ENST00000504203 AZU1P20160 251 aa9.44□□□□□ -0.9
MATR3-233ENST00000504203 STHQ8IWL8 128 aa9.44□□□□□ -0.9
MATR3-233ENST00000504203 ZNF479Q96JC4 524 aa9.44□□□□□ -0.9
MATR3-233ENST00000504203 TSSC4Q9Y5U2 329 aaPredicted RBP9.44□□□□□ -0.9
MATR3-233ENST00000504203 ITPR2Q14571 2701 aa9.44□□□□□ -0.9
MATR3-233ENST00000504203 J3QQQ9 107 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 CRYBA4P53673 196 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 IL17DQ8TAD2 202 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 YAE1D1Q9NRH1 226 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 SPANXB1Q9NS25 103 aaPredicted RBP9.43□□□□□ -0.9
MATR3-233ENST00000504203 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 PLA2G2AP14555 144 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 UBE2D1P51668 147 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 RRN3P1Q2M238 152 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
MATR3-233ENST00000504203 SETD2Q9BYW2 2564 aaPredicted RBP9.43□□□□□ -0.9
MATR3-233ENST00000504203 LEPROTO15243 131 aa9.42□□□□□ -0.9
MATR3-233ENST00000504203 SRSF9Q13242 221 aaKnown RBP eCLIP9.42□□□□□ -0.9
MATR3-233ENST00000504203 SLC25A29Q8N8R3 303 aa9.42□□□□□ -0.9
MATR3-233ENST00000504203 DNAJC30Q96LL9 226 aa9.42□□□□□ -0.9
MATR3-233ENST00000504203 MTORP42345 2549 aa9.42□□□□□ -0.9
MATR3-233ENST00000504203 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
MATR3-233ENST00000504203 A6NJY4 79 aa9.41□□□□□ -0.9
MATR3-233ENST00000504203 CEMP1Q6PRD7 247 aaPredicted RBP9.41□□□□□ -0.9
MATR3-233ENST00000504203 HELZ2Q9BYK8 2649 aaKnown RBP9.41□□□□□ -0.9
MATR3-233ENST00000504203 J3QKU1 62 aa9.4□□□□□ -0.9
MATR3-233ENST00000504203 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
MATR3-233ENST00000504203 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.9
MATR3-233ENST00000504203 K7ERU9 68 aa9.4□□□□□ -0.91
MATR3-233ENST00000504203 SAP30O75446 220 aa9.4□□□□□ -0.91
MATR3-233ENST00000504203 IGHV3-30P01768 117 aa9.4□□□□□ -0.91
MATR3-233ENST00000504203 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.91
MATR3-233ENST00000504203 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.91
MATR3-233ENST00000504203 UBE2D4Q9Y2X8 147 aa9.4□□□□□ -0.91
MATR3-233ENST00000504203 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.91
MATR3-233ENST00000504203 UNC79Q9P2D8 2635 aa9.39□□□□□ -0.91
MATR3-233ENST00000504203 IGHV3OR16-12A0A075B7B8 117 aa9.39□□□□□ -0.91
MATR3-233ENST00000504203 RNF151Q2KHN1 245 aa9.39□□□□□ -0.91
MATR3-233ENST00000504203 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.911e-27■■□□□ 13.5
MATR3-233ENST00000504203 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
MATR3-233ENST00000504203 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
MATR3-233ENST00000504203 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.37□□□□□ -0.91
MATR3-233ENST00000504203 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 IGKV2-29A2NJV5 120 aaPredicted RBP9.37□□□□□ -0.91
MATR3-233ENST00000504203 ADARB2-AS1A8MUL3 147 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 IGLV1-51P01701 117 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 CMC4P56277 68 aaPredicted RBP9.37□□□□□ -0.91
MATR3-233ENST00000504203 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 HILS1P60008 231 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 COTL1Q14019 142 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
MATR3-233ENST00000504203 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
MATR3-233ENST00000504203 IGHV3-64A0A075B6Q5 118 aa9.36□□□□□ -0.91
MATR3-233ENST00000504203 TRGV1A0A0A0MS02 117 aa9.36□□□□□ -0.91
MATR3-233ENST00000504203 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
MATR3-233ENST00000504203 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
MATR3-233ENST00000504203 C19orf73Q9NVV2 129 aa9.36□□□□□ -0.91
MATR3-233ENST00000504203 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
MATR3-233ENST00000504203 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
MATR3-233ENST00000504203 C10orf126Q8N4M7 172 aa9.36□□□□□ -0.91
MATR3-233ENST00000504203 ZNF418Q8TF45 676 aaPredicted RBP9.36□□□□□ -0.91
MATR3-233ENST00000504203 F8W1H4 67 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 G3V4G9 280 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 H3BMG7 143 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 CFC1P0CG37 223 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 Q6ZTI0 123 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 Q6ZUT4 128 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 NDUFA7O95182 113 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 TSPAN13O95857 204 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 TIMM21Q9BVV7 248 aa9.35□□□□□ -0.91
MATR3-233ENST00000504203 APOMO95445 188 aa9.34□□□□□ -0.91
MATR3-233ENST00000504203 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
MATR3-233ENST00000504203 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 TRBV10-1A0A0K0K1A3 114 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 VPS25Q9BRG1 176 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 PRO0461Q9UI25 63 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 TRAV8-3A0A0A6YYJ7 113 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 A0A0J9YXY3 114 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 UBE2D3P61077 147 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 UBE2D2P62837 147 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
MATR3-233ENST00000504203 WFDC2Q14508 124 aa9.33□□□□□ -0.92
MATR3-233ENST00000504203 K7EQD1 137 aa9.32□□□□□ -0.92
MATR3-233ENST00000504203 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
MATR3-233ENST00000504203 VSIG2Q96IQ7 327 aa9.32□□□□□ -0.92
MATR3-233ENST00000504203 TEX48A0A1B0GUV7 120 aa9.31□□□□□ -0.92
MATR3-233ENST00000504203 TMEM238C9JI98 176 aa9.31□□□□□ -0.92
MATR3-233ENST00000504203 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
MATR3-233ENST00000504203 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
MATR3-233ENST00000504203 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
MATR3-233ENST00000504203 LITAFQ99732 161 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms