RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 DOPEY2Q9Y3R5 2298 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 IGLV5-45A0A087WSX0 123 aa10.9□□□□□ -0.66
SNF8-203ENST00000504000 TIRAPP58753 221 aa10.9□□□□□ -0.66
SNF8-203ENST00000504000 DEFB131AP59861 70 aa10.9□□□□□ -0.66
SNF8-203ENST00000504000 ITPR1Q14643 2758 aa10.9□□□□□ -0.66
SNF8-203ENST00000504000 TRIAP1O43715 76 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 TGFAP01135 160 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 COX6CP09669 75 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 DUX3Q96PT4 197 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 TRAV8-3A0A0A6YYJ7 113 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 KNCNA6PVL3 124 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 PROK1P58294 105 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 CITED1Q99966 193 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 PEMTQ9UBM1 199 aa10.89□□□□□ -0.67
SNF8-203ENST00000504000 VPS13CQ709C8 3753 aa10.88□□□□□ -0.67
SNF8-203ENST00000504000 RBMY1BA6NDE4 496 aaKnown RBP10.88□□□□□ -0.67
SNF8-203ENST00000504000 RBMY1EA6NEQ0 496 aaKnown RBP10.88□□□□□ -0.67
SNF8-203ENST00000504000 H3BT86 120 aa10.88□□□□□ -0.67
SNF8-203ENST00000504000 H7C2G1 150 aa10.88□□□□□ -0.67
SNF8-203ENST00000504000 PRSS2P07478 247 aa10.88□□□□□ -0.67
SNF8-203ENST00000504000 RBMY1DP0C7P1 496 aaKnown RBP10.88□□□□□ -0.67
SNF8-203ENST00000504000 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
SNF8-203ENST00000504000 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
SNF8-203ENST00000504000 IGHV3-73A0A0B4J1V6 119 aa10.87□□□□□ -0.67
SNF8-203ENST00000504000 CEMP1Q6PRD7 247 aaPredicted RBP10.87□□□□□ -0.67
SNF8-203ENST00000504000 Q8N2B8 174 aa10.87□□□□□ -0.67
SNF8-203ENST00000504000 RS1O15537 224 aa10.87□□□□□ -0.67
SNF8-203ENST00000504000 TMEM61Q8N0U2 210 aa10.87□□□□□ -0.67
SNF8-203ENST00000504000 NDUFA1O15239 70 aa10.86□□□□□ -0.67
SNF8-203ENST00000504000 Q6ZSN1 163 aa10.86□□□□□ -0.67
SNF8-203ENST00000504000 FAM19A3Q7Z5A8 133 aa10.86□□□□□ -0.67
SNF8-203ENST00000504000 TEX29Q8N6K0 151 aa10.86□□□□□ -0.67
SNF8-203ENST00000504000 NTN5Q8WTR8 489 aaPredicted RBP10.86□□□□□ -0.67
SNF8-203ENST00000504000 NCOR2Q9Y618 2525 aa10.85□□□□□ -0.67
SNF8-203ENST00000504000 ADARB2-AS1A8MUL3 147 aa10.85□□□□□ -0.67
SNF8-203ENST00000504000 HTN1P15515 57 aa10.85□□□□□ -0.67
SNF8-203ENST00000504000 Q6Q795 121 aa10.85□□□□□ -0.67
SNF8-203ENST00000504000 PRRC2AP48634 2157 aaKnown RBP10.85□□□□□ -0.67
SNF8-203ENST00000504000 CSPG4Q6UVK1 2322 aa10.84□□□□□ -0.67
SNF8-203ENST00000504000 SLURP1P55000 103 aa10.84□□□□□ -0.67
SNF8-203ENST00000504000 MAP6D1Q9H9H5 199 aa10.84□□□□□ -0.67
SNF8-203ENST00000504000 DOPEY1Q5JWR5 2465 aa10.84□□□□□ -0.67
SNF8-203ENST00000504000 SPTBN4Q9H254 2564 aa10.84□□□□□ -0.67
SNF8-203ENST00000504000 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 IGLV5-39A0A0G2JS06 123 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 LST1O00453 97 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 CIRBPQ14011 172 aaKnown RBP10.83□□□□□ -0.68
SNF8-203ENST00000504000 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
SNF8-203ENST00000504000 DEFB121Q5J5C9 76 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 C4orf3Q8WVX3 66 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 UBE2WQ96B02 151 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 Q9UF83 564 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
SNF8-203ENST00000504000 CHD8Q9HCK8 2581 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.83□□□□□ -0.68
SNF8-203ENST00000504000 TRAV26-1A0A087WT03 109 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 IGKV2-29A2NJV5 120 aaPredicted RBP10.83□□□□□ -0.68
SNF8-203ENST00000504000 H7C423 109 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 INSP01308 110 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 HERVK_113P63121 156 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 LINC01587Q99440 93 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 PPDPFQ9H3Y8 114 aa10.83□□□□□ -0.68
SNF8-203ENST00000504000 FAM240AA0A1B0GVK7 77 aa10.82□□□□□ -0.68
SNF8-203ENST00000504000 RNASE13Q5GAN3 156 aaKnown RBP10.82□□□□□ -0.68
SNF8-203ENST00000504000 C2orf82Q6UX34 121 aa10.82□□□□□ -0.68
SNF8-203ENST00000504000 CDKN2A-AS1Q9UH64 79 aa10.82□□□□□ -0.68
SNF8-203ENST00000504000 SNCGO76070 127 aa10.81□□□□□ -0.68
SNF8-203ENST00000504000 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
SNF8-203ENST00000504000 BEX4Q9NWD9 120 aaPredicted RBP10.81□□□□□ -0.68
SNF8-203ENST00000504000 COL12A1Q99715 3063 aa10.81□□□□□ -0.68
SNF8-203ENST00000504000 TRAV8-4A0A0B4J246 113 aa10.81□□□□□ -0.68
SNF8-203ENST00000504000 TEX49A0A1B0GTD5 131 aa10.81□□□□□ -0.68
SNF8-203ENST00000504000 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
SNF8-203ENST00000504000 GAGE2BQ13066 116 aa10.8□□□□□ -0.68
SNF8-203ENST00000504000 DEFB114Q30KQ6 69 aa10.8□□□□□ -0.68
SNF8-203ENST00000504000 GAGE2EQ4V326 116 aa10.8□□□□□ -0.68
SNF8-203ENST00000504000 GAGE2DQ9UEU5 116 aa10.8□□□□□ -0.68
SNF8-203ENST00000504000 SORL1Q92673 2214 aa10.79□□□□□ -0.68
SNF8-203ENST00000504000 TRBV10-1A0A0K0K1A3 114 aa10.79□□□□□ -0.68
SNF8-203ENST00000504000 A8MZ25 164 aa10.79□□□□□ -0.68
SNF8-203ENST00000504000 DGAT2L7PQ6IED9 249 aa10.79□□□□□ -0.68
SNF8-203ENST00000504000 IL17DQ8TAD2 202 aa10.79□□□□□ -0.68
SNF8-203ENST00000504000 ANAPC13Q9BS18 74 aa10.79□□□□□ -0.68
SNF8-203ENST00000504000 IGHV3OR16-12A0A075B7B8 117 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 PRM2P04554 102 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 DEFB136Q30KP8 78 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 IGHV4-31P0DP07 118 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 C18orf65Q6ZTR6 163 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.78□□□□□ -0.68
SNF8-203ENST00000504000 DYNLRB2Q8TF09 96 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 NRGNQ92686 78 aa10.78□□□□□ -0.68
SNF8-203ENST00000504000 CELSR2Q9HCU4 2923 aa10.77□□□□□ -0.69
SNF8-203ENST00000504000 LINC00242Q5T6M2 205 aa10.77□□□□□ -0.69
SNF8-203ENST00000504000 LINC00308Q8TCZ7 52 aa10.77□□□□□ -0.69
SNF8-203ENST00000504000 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms