RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 COX11Q9Y6N1 276 aa3.57□□□□□ -1.84
SCFD2-203ENST00000503450 ICOSQ9Y6W8 199 aa3.57□□□□□ -1.84
SCFD2-203ENST00000503450 IGHV3-73A0A0B4J1V6 119 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 TRBV6-4A0A1B0GX49 114 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 GYPEP15421 78 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 CCL18P55774 89 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 CACNG7P62955 275 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 RHOHQ15669 191 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 MRPL23Q16540 153 aaKnown RBP3.56□□□□□ -1.84
SCFD2-203ENST00000503450 SPATA45Q537H7 98 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 CT83Q5H943 113 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 FAM74A4Q5TZK3 123 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 SPANXN1Q5VSR9 72 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 UFSP1Q6NVU6 142 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 SMIM15Q7Z3B0 74 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 SLC25A29Q8N8R3 303 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 SVIPQ8NHG7 77 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 AP1S3Q96PC3 154 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 TPPP3Q9BW30 176 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 JPT2Q9H910 190 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 LAMTOR2Q9Y2Q5 125 aa3.56□□□□□ -1.84
SCFD2-203ENST00000503450 A0A087WWL8 130 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 MUC21A0A0G2JKD1 596 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 MUC21A0A140T8X8 626 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 A8MWL6 223 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 F2Z2F3 143 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 K7EQD1 137 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 CRYGDP07320 174 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 LINC00694P0DN24 101 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 SRIP30626 198 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 KRTDAPP60985 99 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 RNF151Q2KHN1 245 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 LYPD5Q6UWN5 251 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 LYZL1Q6UWQ5 148 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 Q6ZN92 141 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 Q6ZSN1 163 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 SH2D6Q7Z4S9 175 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 C6orf223Q8N319 242 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 OR10G8Q8NGN5 311 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 GTSF1Q8WW33 167 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 PRADC1Q9BSG0 188 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 CNFNQ9BYD5 112 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 SAMD10Q9BYL1 202 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 MRPL18Q9H0U6 180 aaKnown RBP3.55□□□□□ -1.84
SCFD2-203ENST00000503450 Q9H8V8 135 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 OSTCQ9NRP0 149 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 Q9UF83 564 aa3.55□□□□□ -1.84
SCFD2-203ENST00000503450 CHTOPQ9Y3Y2 248 aaKnown RBP3.55□□□□□ -1.84
SCFD2-203ENST00000503450 FAM231BA6NCW3 169 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 FAM229AH3BQW9 127 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 SMIM17P0DL12 118 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 LINC00315P59091 139 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 ZNF56Q15929 161 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 C1orf134Q5TEV5 83 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 WDR73Q6P4I2 378 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 Q6ZVH6 145 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 NIT1Q86X76 327 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 BAGE3Q86Y29 109 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 WFDC10BQ8IUB3 73 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 C14orf178Q8N769 122 aaPredicted RBP3.54□□□□□ -1.84
SCFD2-203ENST00000503450 TSKUQ8WUA8 353 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 GFRA4Q9GZZ7 299 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 TNFRSF18Q9Y5U5 241 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 KIF25-AS1Q9Y6Z4 181 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 V9GYV3 84 aa3.54□□□□□ -1.84
SCFD2-203ENST00000503450 TRBV10-1A0A0K0K1A3 114 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 HIGD1CA8MV81 97 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 TMEM238C9JI98 176 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 MGPP08493 103 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 C3orf79P0CE67 100 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 NTF3P20783 257 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 HINT1P49773 126 aaPredicted RBP3.53□□□□□ -1.84
SCFD2-203ENST00000503450 FOXA3P55318 350 aaPredicted RBP3.53□□□□□ -1.84
SCFD2-203ENST00000503450 TIRAPP58753 221 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 KRTAP10-2P60368 255 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 TWIST1Q15672 202 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 OCIAD2Q56VL3 154 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 OR10J3Q5JRS4 329 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 VPS25Q9BRG1 176 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 GNB1LQ9BYB4 327 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 KRTAP4-5Q9BYR2 181 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 CST9LQ9H4G1 147 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 DPH3P1Q9H4G8 78 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 MSRB1Q9NZV6 116 aa3.53□□□□□ -1.84
SCFD2-203ENST00000503450 TRAV9-2A0A087WT02 112 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 A0A1B0GUT8 65 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 SMIM27A0A1W2PRY6 76 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 GAGE12JA6NER3 117 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 HSBP1L1C9JCN9 74 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 F5H697 171 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 TAX1BP3O14907 124 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 MT-ND6P03923 174 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 DNAH10OSP0CZ25 163 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 PMCHP20382 165 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 EVI2AP22794 236 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 FUSP35637 526 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCFD2-203ENST00000503450 AMTP48728 403 aa3.52□□□□□ -1.85
SCFD2-203ENST00000503450 RPL36AP83881 106 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms