RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 UBE2WQ96B02 151 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3-49A0A0A0MS15 119 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 CRYGDP07320 174 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 NPC2P61916 151 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 PRO1854Q9UHT4 67 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 A0A087WVE0 104 aa4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 A0A0U1RQV1 116 aa4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 DLX6P56179 175 aa4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 HERVK_113P61574 105 aa4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 TMEM263Q8WUH6 116 aaKnown RBP4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 AMELXQ99217 191 aa4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 NXT2Q9NPJ8 142 aaKnown RBP4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 NDUFA4L2Q9NRX3 87 aa4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 Q9UF83 564 aa4.34□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGKV3-7A0A075B6H7 116 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 A0A1B0GX51 115 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 LINC01546A6NGU7 62 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 SAA4P35542 130 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 DYNAPQ8N1N2 210 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 OR13C6PQ8NH95 151 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGHV4-61A0A0C4DH41 118 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGHV3-66A0A0C4DH42 116 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 C11orf86A6NJI1 115 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 F8VRH5 84 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 UQCRQO14949 82 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGLV1-47P01700 117 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 WFDC11Q8NEX6 87 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 C11orf21Q9P2W6 132 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 AKAP9Q99996 3911 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 RPL13AP40429 203 aaKnown RBP4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 TMEM170BQ5T4T1 132 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 C11orf71Q6IPW1 123 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 C2orf82Q6UX34 121 aa4.33□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGHV4-30-2A0A087WSY4 118 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 TSHBP01222 138 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGLV2-23P01705 113 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 RHOHQ15669 191 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 LINC00311Q8N616 119 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 TMEM86BQ8N661 226 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 NEXN-AS1Q8NBZ9 246 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 RPL39LQ96EH5 51 aaKnown RBP4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 TRAV13-1A0A0B4J241 112 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 K7EMT4 169 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 POU2AF1Q16633 256 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 MRGPRG-AS1Q2M3A8 158 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 MUSTN1Q8IVN3 82 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 METTL26Q96S19 204 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 ZNF469Q96JG9 3925 aaPredicted RBP4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGLV4-69A0A075B6H9 119 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 F8W735 103 aaPredicted RBP4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 COX7CP15954 63 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 UBE2E1P51965 193 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 SLC25A39Q9BZJ4 359 aaPredicted RBP4.32□□□□□ -1.72
SOX2-OT-218ENST00000498731 LINC01619G3V211 115 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 G3V318 75 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 RNF182Q8N6D2 247 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 UBE2E2Q96LR5 201 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 OPRPNQ99935 248 aaPredicted RBP4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 UPK3BQ9BT76 320 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 LINC00574Q9H8X3 128 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 OTORQ9NRC9 128 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 TRBV10-2A0A0K0K1G8 114 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 FHL2Q14192 279 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 LAGE3Q14657 143 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 Q1RN00 199 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 SDIM1Q6ZPB5 146 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 FAM223AQ8IWN6 122 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 ZNRF2Q8NHG8 242 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 SORL1Q92673 2214 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 WNK1Q9H4A3 2382 aa4.31□□□□□ -1.72
SOX2-OT-218ENST00000498731 TRBV7-1A0A0A6YYK4 115 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 M0R1W7 72 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGHV3-11P01762 117 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 PLNP26678 52 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 DPH3P1Q9H4G8 78 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 TRBV19A0A075B6N1 114 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 TRAV12-3A0A0B4J271 114 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 PRAC2D3DTV9 90 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 PRSS2P07478 247 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 LMO4P61968 165 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 RPL39P62891 51 aaKnown RBP4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 SMR3AQ99954 134 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 AGPAT4-IT1Q9H0P7 198 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 TRAV8-3A0A0A6YYJ7 113 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGHV4-38-2P0DP08 117 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 CRYGAP11844 174 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 LINC00482Q8N8I6 264 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 SLC25A29Q8N8R3 303 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 SCGB3A1Q96QR1 104 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
SOX2-OT-218ENST00000498731 LY6LH3BQJ8 138 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 H3BUX3 64 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 LCE2BO14633 110 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 NDPQ00604 133 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms