RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 LINC00527Q9UJ94 153 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 ZNF256Q9Y2P7 627 aaPredicted RBP3.32□□□□□ -1.88
TNC-208ENST00000498724 ROS1P08922 2347 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 ITPR3Q14573 2671 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 MAP1AP78559 2803 aaPredicted RBP3.32□□□□□ -1.88
TNC-208ENST00000498724 ZNF469Q96JG9 3925 aaPredicted RBP3.32□□□□□ -1.88
TNC-208ENST00000498724 NIPBLQ6KC79 2804 aaeCLIP3.31□□□□□ -1.88
TNC-208ENST00000498724 AKAP6Q13023 2319 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 ABCA4P78363 2273 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 IGHV3OR16-10A0A075B7F0 116 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 TRAV12-3A0A0B4J271 114 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 IGHV3-16A0A0C4DH30 117 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 TRBV10-2A0A0K0K1G8 114 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 M0R2P5 195 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 RHODO00212 210 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 IGHV3-11P01762 117 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 SRD5A1P18405 259 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 GATA3P23771 443 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 RPL13AP40429 203 aaKnown RBP3.31□□□□□ -1.88
TNC-208ENST00000498724 NDUFV3P56181 108 aaKnown RBP3.31□□□□□ -1.88
TNC-208ENST00000498724 DEFB113Q30KQ7 82 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 Q6Q795 121 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 C2orf82Q6UX34 121 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 C9orf85Q96MD7 179 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 TIMM21Q9BVV7 248 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 JPT2Q9H910 190 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 UBTD1Q9HAC8 227 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 BEX4Q9NWD9 120 aaPredicted RBP3.31□□□□□ -1.88
TNC-208ENST00000498724 MDFICQ9P1T7 246 aa3.31□□□□□ -1.88
TNC-208ENST00000498724 TRGV11A0A075B6L2 103 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 A0A0J9YXV3 536 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 TRBV30A0A0K0K1B3 111 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 GAGE12JA6NER3 117 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 B5MCH6 92 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 H3BT86 120 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 I3L3M4 83 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 M0QY20 66 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 GAGE7O76087 117 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 BRI3O95415 125 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 LY6G6DO95868 133 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 COX6CP09669 75 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 GAGE12FP0CL80 117 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 GAGE12GP0CL81 117 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 GAGE12IP0CL82 117 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 CD28P10747 220 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 IFITM1P13164 125 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 LMO4P61968 165 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 GAGE4Q13068 117 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 MRPL23Q16540 153 aaKnown RBP3.3□□□□□ -1.88
TNC-208ENST00000498724 XP32Q5T750 250 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 C15orf53Q8NAA6 179 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 C20orf203Q8NBC4 194 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 LINC01600Q96MT4 127 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 ODF3Q96PU9 254 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 OPRPNQ99935 248 aaPredicted RBP3.3□□□□□ -1.88
TNC-208ENST00000498724 DAZ1Q9NQZ3 744 aaKnown RBP3.3□□□□□ -1.88
TNC-208ENST00000498724 YAE1D1Q9NRH1 226 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 ICOSQ9Y6W8 199 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 VPS13CQ709C8 3753 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 ARHGAP32A7KAX9 2087 aa3.3□□□□□ -1.88
TNC-208ENST00000498724 NF1P21359 2839 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 ACANP16112 2415 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 IGLV4-3A0A075B6K6 122 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 IGHV1OR15-1A0A075B7D0 117 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 TRAV4A0A0B4J268 109 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 K7EMT4 169 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 TRIAP1O43715 76 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 IGKV3-20P01619 116 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 PRSS2P07478 247 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 NHLRC4P0CG21 123 aaPredicted RBP3.29□□□□□ -1.88
TNC-208ENST00000498724 IGHV3-30-3P0DP02 117 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 LY6EQ16553 131 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 MIAQ16674 131 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 SPANXDQ9BXN6 97 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 BPESC1Q9GZL8 116 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 SPANXCQ9NY87 97 aa3.29□□□□□ -1.88
TNC-208ENST00000498724 TRAV12-2A0A075B6T6 113 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 IGHV1-58A0A0C4DH39 117 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 TEX49A0A1B0GTD5 131 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 A0A1W2PPR1 153 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 A6NDX4 124 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 CCDC179H3BU77 68 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 CRLF1O75462 422 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 IGHG2P01859 326 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 ELANEP08246 267 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 SNRPD3P62318 126 aaKnown RBP3.28□□□□□ -1.88
TNC-208ENST00000498724 BRD3OSQ6XYD6 125 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 PRIMA1Q86XR5 153 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 KRTAP1-3Q8IUG1 177 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 Q96MF0 132 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 LITAFQ99732 161 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 SPXQ9BT56 116 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 NDUFA12Q9UI09 145 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 PYGO1Q9Y3Y4 419 aa3.28□□□□□ -1.88
TNC-208ENST00000498724 MTORP42345 2549 aa3.27□□□□□ -1.89
TNC-208ENST00000498724 TRAV8-3A0A0A6YYJ7 113 aa3.27□□□□□ -1.89
TNC-208ENST00000498724 FAM240AA0A1B0GVK7 77 aa3.27□□□□□ -1.89
TNC-208ENST00000498724 TINCRA0A1B0GVN0 87 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms