RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 UBE2G1P62253 170 aa3.51□□□□□ -1.85
UBE3C-208ENST00000497368 CIRBPQ14011 172 aaKnown RBP3.51□□□□□ -1.85
UBE3C-208ENST00000497368 CLPSL2Q6UWE3 100 aa3.51□□□□□ -1.85
UBE3C-208ENST00000497368 C20orf203Q8NBC4 194 aa3.51□□□□□ -1.85
UBE3C-208ENST00000497368 FAM213BQ8TBF2 198 aa3.51□□□□□ -1.85
UBE3C-208ENST00000497368 PHLDA3Q9Y5J5 127 aa3.51□□□□□ -1.85
UBE3C-208ENST00000497368 IGLV4-60A0A075B6I1 120 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 HMSDA8MTL9 139 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 M0QY20 66 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 RPL35P42766 123 aaKnown RBP3.5□□□□□ -1.85
UBE3C-208ENST00000497368 RAB4BP61018 213 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 RBX1P62877 108 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 ZNF56Q15929 161 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 CENPWQ5EE01 88 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 CST9LP1Q5W188 147 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 DGAT2L7PQ6IED9 249 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 C15orf54Q8N8G6 183 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 C15orf56Q8N910 161 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 STOML3Q8TAV4 291 aa3.5□□□□□ -1.85
UBE3C-208ENST00000497368 NKX6-2Q9C056 277 aaPredicted RBP3.5□□□□□ -1.85
UBE3C-208ENST00000497368 RAB19A4D1S5 217 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 K7EN84 100 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 CHTF8P0CG12 524 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 CTRLP40313 264 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 RPL36AP83881 106 aaKnown RBP3.49□□□□□ -1.85
UBE3C-208ENST00000497368 GAGE6Q13070 117 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 IQCJQ1A5X6 159 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 BAGE2Q86Y30 109 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 C9orf163Q8N9P6 203 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 DEFB104AQ8WTQ1 72 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 SFT2D1Q8WV19 159 aa3.49□□□□□ -1.85
UBE3C-208ENST00000497368 TRAV1-1A0A0B4J248 108 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 GAS8-AS1O95177 125 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 HLA-DQA1P01909 254 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 SDIM1Q6ZPB5 146 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 TMUB2Q71RG4 321 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 TCTE3Q8IZS6 198 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 AP1S3Q96PC3 154 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 CNFNQ9BYD5 112 aa3.48□□□□□ -1.85
UBE3C-208ENST00000497368 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 A0A087WX48 190 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 UMAD1C9J7I0 102 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 ANGP03950 147 aaKnown RBP3.47□□□□□ -1.85
UBE3C-208ENST00000497368 SULT1A2P50226 295 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 NKX2-5P52952 324 aaPredicted RBP3.47□□□□□ -1.85
UBE3C-208ENST00000497368 FOXA3P55318 350 aaPredicted RBP3.47□□□□□ -1.85
UBE3C-208ENST00000497368 SSTP61278 116 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 CNBPP62633 177 aaKnown RBP3.47□□□□□ -1.85
UBE3C-208ENST00000497368 MIAQ16674 131 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 AKAP14Q86UN6 197 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 LINC00269Q8N2A0 174 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 SPACA4Q8TDM5 124 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 GTSF1Q8WW33 167 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 RMI2Q96E14 147 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 CHCHD5Q9BSY4 110 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 GNG13Q9P2W3 67 aa3.47□□□□□ -1.85
UBE3C-208ENST00000497368 TRAV26-2A0A0B4J265 109 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 A0A0D9SG52 128 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 PFDN1O60925 122 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 OXTP01178 125 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 S100A9P06702 114 aaKnown RBP3.46□□□□□ -1.86
UBE3C-208ENST00000497368 MGPP08493 103 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 BCL2P10415 239 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 RPL37AP61513 92 aaKnown RBP3.46□□□□□ -1.86
UBE3C-208ENST00000497368 REG3AQ06141 175 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 Q0VG73 95 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 SPANXN1Q5VSR9 72 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 LYZL1Q6UWQ5 148 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 FER1L6-AS1Q8NA97 138 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 GATD1Q8NB37 220 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 OR2D3Q8NGH3 330 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
UBE3C-208ENST00000497368 PGLYRP4Q96LB8 373 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 MANBALQ9NQG1 85 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 URGCP-MRPS24S4R325 110 aa3.46□□□□□ -1.86
UBE3C-208ENST00000497368 TRBV25-1A0A075B6N4 114 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 IGHV1-24A0A0C4DH33 117 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 A0A1B0GUV1 79 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 KANTRA0A1W2PQU2 76 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 TMEM262E9PQX1 116 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 CRPP02741 224 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 MEF2BQ02080 365 aaPredicted RBP3.45□□□□□ -1.86
UBE3C-208ENST00000497368 ELOBQ15370 118 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 RASL11AQ6T310 242 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 C9orf62Q8N4C0 152 aa3.45□□□□□ -1.86
UBE3C-208ENST00000497368 RNASE7Q9H1E1 156 aaKnown RBP3.45□□□□□ -1.86
UBE3C-208ENST00000497368 A0A087WYN8 130 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 FAM231BA6NCW3 169 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 IFITM10A6NMD0 228 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 PRSS2P07478 247 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 NTF3P20783 257 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 C14orf177Q52M58 125 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 SMIM12Q96EX1 92 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 TPPP3Q9BW30 176 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 DPH3P1Q9H4G8 78 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 PLAC8Q9NZF1 115 aa3.44□□□□□ -1.86
UBE3C-208ENST00000497368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
UBE3C-208ENST00000497368 A0A096LNI7 61 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms