RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PVALEFA0A1B0GWK0 134 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 NPC2P61916 151 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 RBM3P98179 157 aaKnown RBP2.14□□□□□ -2.07
SNX13-211ENST00000496855 RHOHQ15669 191 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 SPANXN1Q5VSR9 72 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 LYPD5Q6UWN5 251 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 TMEM141Q96I45 108 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 REG4Q9BYZ8 158 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 ORMDL1Q9P0S3 153 aa2.14□□□□□ -2.07
SNX13-211ENST00000496855 C2CD3Q4AC94 2353 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 RELNP78509 3460 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 MYO9AB2RTY4 2548 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 PHRF1Q9P1Y6 1649 aaKnown RBP2.13□□□□□ -2.07
SNX13-211ENST00000496855 MYO5CQ9NQX4 1742 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 PCNX2A6NKB5 2137 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 COL5A1-AS1Q5SY13 56 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 COA5Q86WW8 74 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 DPH3P1Q9H4G8 78 aa2.13□□□□□ -2.07
SNX13-211ENST00000496855 PLXNA2O75051 1894 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 NBEAQ8NFP9 2946 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 LRRIQ1Q96JM4 1722 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 SAMD9Q5K651 1589 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 TRAV2A0A0B4J234 112 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 TRBV6-4A0A1B0GX49 114 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 POLR2JP52435 117 aaKnown RBP2.12□□□□□ -2.07
SNX13-211ENST00000496855 IQCJQ1A5X6 159 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 ODF3Q96PU9 254 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 SPANXDQ9BXN6 97 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 UGGT2Q9NYU1 1516 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 WDR87Q6ZQQ6 2873 aa2.12□□□□□ -2.07
SNX13-211ENST00000496855 COL5A3P25940 1745 aaPredicted RBP2.11□□□□□ -2.07
SNX13-211ENST00000496855 DNHD1Q96M86 4753 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 CEP250Q9BV73 2442 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 ABCA2Q9BZC7 2435 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 ARHGEF5Q12774 1597 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 TENM4Q6N022 2769 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 CASKIN1Q8WXD9 1431 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 SCN11AQ9UI33 1791 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 RBAKDNA6NC62 111 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 PIPP12273 146 aaPredicted RBP2.11□□□□□ -2.07
SNX13-211ENST00000496855 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 SPRNQ5BIV9 151 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 C9orf116Q5BN46 136 aaPredicted RBP2.11□□□□□ -2.07
SNX13-211ENST00000496855 SLC48A1Q6P1K1 146 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 SBSPONQ8IVN8 264 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 C10orf82Q8WW14 230 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 CDC42SE1Q9NRR8 79 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 ITSN1Q15811 1721 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 KNDC1Q76NI1 1749 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 ZZEF1O43149 2961 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 PLXNC1O60486 1568 aa2.11□□□□□ -2.07
SNX13-211ENST00000496855 AKAP12Q02952 1782 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 PTPRZ1P23471 2315 aaPredicted RBP2.1□□□□□ -2.07
SNX13-211ENST00000496855 MYO15AQ9UKN7 3530 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 SYCP2Q9BX26 1530 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 TIAM2Q8IVF5 1701 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 FBN1P35555 2871 aaKnown RBP2.1□□□□□ -2.07
SNX13-211ENST00000496855 IGKV3-7A0A075B6H7 116 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 A0A0J9YY99 117 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 TRBV6-5A0A0K0K1A5 114 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 TMEM262E9PQX1 116 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 IGLV3-1P01715 115 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 MT-ATP8P03928 68 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 ZCCHC13Q8WW36 166 aaKnown RBP2.1□□□□□ -2.07
SNX13-211ENST00000496855 PPDPFLQ8WWR9 84 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 ALPK2Q86TB3 2170 aa2.1□□□□□ -2.07
SNX13-211ENST00000496855 UBR5O95071 2799 aaPredicted RBP2.1□□□□□ -2.07
SNX13-211ENST00000496855 RP1L1Q8IWN7 2480 aaPredicted RBP2.09□□□□□ -2.07
SNX13-211ENST00000496855 ARFGEF3Q5TH69 2177 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 TNRC6AQ8NDV7 1962 aaKnown RBP2.09□□□□□ -2.07
SNX13-211ENST00000496855 CTTNBP2Q8WZ74 1663 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 TMEM30CPA0ZSE6 113 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 C9orf62Q8N4C0 152 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 C4orf3Q8WVX3 66 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 LINC00474Q9P2X8 69 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 LINC00312Q9Y6C7 94 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 ARFGEF1Q9Y6D6 1849 aa2.09□□□□□ -2.07
SNX13-211ENST00000496855 POLQO75417 2590 aa2.09□□□□□ -2.08
SNX13-211ENST00000496855 SETD2Q9BYW2 2564 aaPredicted RBP2.09□□□□□ -2.08
SNX13-211ENST00000496855 DUOX2Q9NRD8 1548 aa2.09□□□□□ -2.08
SNX13-211ENST00000496855 LOC400499M0QZD8 3231 aa2.09□□□□□ -2.08
SNX13-211ENST00000496855 SMG1Q96Q15 3661 aaKnown RBP2.08□□□□□ -2.08
SNX13-211ENST00000496855 TCRBV3S1A0A5B6 114 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 NUPR2A6NF83 97 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 NUPR1O60356 82 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 CBLN1P23435 193 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 FAM74A1Q5RGS3 127 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 C12orf73Q69YU5 71 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 C5orf38Q86SI9 138 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 SPTSSBQ8NFR3 76 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 IFI27L1Q96BM0 104 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 KIAA1551Q9HCM1 1747 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 HFM1A2PYH4 1435 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 CPSF1Q10570 1443 aaKnown RBP2.08□□□□□ -2.08
SNX13-211ENST00000496855 SPTAN1Q13813 2472 aaKnown RBP2.08□□□□□ -2.08
SNX13-211ENST00000496855 VPS13AQ96RL7 3174 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 NAV3Q8IVL0 2385 aa2.08□□□□□ -2.08
SNX13-211ENST00000496855 ADGRL2O95490 1459 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms