RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SPTSSBQ8NFR3 76 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 SNHG12Q9BXW3 62 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 CPSF1Q10570 1443 aaKnown RBP0.94□□□□□ -2.26
SSR3-208ENST00000496050 C10orf71Q711Q0 1435 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 ESPL1Q14674 2120 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 MUC22E2RYF6 1773 aaPredicted RBP0.93□□□□□ -2.26
SSR3-208ENST00000496050 DLEC1Q9Y238 1755 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 ABCC10Q5T3U5 1492 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 FLNBO75369 2602 aaKnown RBP0.93□□□□□ -2.26
SSR3-208ENST00000496050 RYR1P21817 5038 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 CASKIN1Q8WXD9 1431 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 CCL3L1P16619 93 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 SSBP1Q04837 148 aaKnown RBP0.93□□□□□ -2.26
SSR3-208ENST00000496050 KLKP1Q107X0 134 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 COL5A1-AS1Q5SY13 56 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 CYP2G1PQ6ZSU1 146 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 PPP1R1CQ8WVI7 109 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 KCPQ6ZWJ8 1503 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 PCNTO95613 3336 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 HECTD1Q9ULT8 2610 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 MYO18BQ8IUG5 2567 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 EPG5Q9HCE0 2579 aa0.93□□□□□ -2.26
SSR3-208ENST00000496050 ITPR3Q14573 2671 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 ANKRD11Q6UB99 2663 aaPredicted RBP0.92□□□□□ -2.26
SSR3-208ENST00000496050 ANKHD1Q8IWZ3 2542 aaKnown RBP0.92□□□□□ -2.26
SSR3-208ENST00000496050 ERCC6L2Q5T890 1561 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 ZNF142P52746 1687 aaPredicted RBP0.92□□□□□ -2.26
SSR3-208ENST00000496050 TRBV7-1A0A0A6YYK4 115 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 PVALEFA0A1B0GWK0 134 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 RBAKDNA6NC62 111 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 GNG2P59768 71 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 S100A10P60903 97 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 RPL37P61927 97 aaKnown RBP0.92□□□□□ -2.26
SSR3-208ENST00000496050 C20orf197Q8N268 126 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 BET1LQ9NYM9 111 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 LINC00474Q9P2X8 69 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 LINC00312Q9Y6C7 94 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 TEX14Q8IWB6 1497 aa0.92□□□□□ -2.26
SSR3-208ENST00000496050 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
SSR3-208ENST00000496050 RBBP6Q7Z6E9 1792 aaKnown RBP0.91□□□□□ -2.26
SSR3-208ENST00000496050 DOPEY1Q5JWR5 2465 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 SPINK7P58062 85 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 ELOF1P60002 83 aaKnown RBP0.91□□□□□ -2.26
SSR3-208ENST00000496050 COX7B2Q8TF08 81 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 DPY30Q9C005 99 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 TMEM14BQ9NUH8 114 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 PIEZO1Q92508 2521 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 NEBP20929 6669 aa0.91□□□□□ -2.26
SSR3-208ENST00000496050 ABCA1O95477 2261 aa0.9□□□□□ -2.26
SSR3-208ENST00000496050 SPHKAPQ2M3C7 1700 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 A0A087WTM6 91 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 LINC00032P0C843 101 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 MYOZ3Q8TDC0 251 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 FAM103A1Q9BTL3 118 aaKnown RBP0.9□□□□□ -2.27
SSR3-208ENST00000496050 PLAC8Q9NZF1 115 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 WDFY4Q6ZS81 3184 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 NCOR1O75376 2440 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 PXDNQ92626 1479 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 ROBO1Q9Y6N7 1651 aa0.9□□□□□ -2.27
SSR3-208ENST00000496050 TROQ12816 1431 aaPredicted RBP0.89□□□□□ -2.27
SSR3-208ENST00000496050 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 SCAPERQ9BY12 1400 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 ARHGAP5Q13017 1502 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 ABCA12Q86UK0 2595 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 LOC285556D6RIA3 1793 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 TRBV7-3A0A075B6L6 115 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 MT-ATP8P03928 68 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 C10orf128Q5T292 105 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 MED13LQ71F56 2210 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 ABCC5O15440 1437 aa0.89□□□□□ -2.27
SSR3-208ENST00000496050 BDP1A6H8Y1 2624 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 TTC37Q6PGP7 1564 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 ADGRL2O95490 1459 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 A0A096LNT2 108 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 SNCAP37840 140 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 EDDM3BP56851 147 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 UBA52P62987 128 aaKnown RBP0.88□□□□□ -2.27
SSR3-208ENST00000496050 Q0VG73 95 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 FAM74A4Q5TZK3 123 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 FAM167A-AS1Q96KT0 104 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 AP4S1Q9Y587 144 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 LENEPQ9Y5L5 61 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 KALRNO60229 2985 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 NSD3Q9BZ95 1437 aa0.88□□□□□ -2.27
SSR3-208ENST00000496050 ARAP2Q8WZ64 1704 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 SPTBN4Q9H254 2564 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 SCRIBQ14160 1630 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 NAP1L6A6NFF2 107 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 KRTDAPP60985 99 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 GNG11P61952 73 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 MGST2Q99735 147 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 WFDC6Q9BQY6 131 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 V9GYV3 84 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 ZNF292O60281 2723 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 CCDC168Q8NDH2 2452 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 FSIP2Q5CZC0 6907 aa0.87□□□□□ -2.27
SSR3-208ENST00000496050 GAPVD1Q14C86 1478 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms