RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 BPESC1Q9GZL8 116 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 CDC42SE2Q9NRR3 84 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 MPDZO75970 2070 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 BRWD1Q9NSI6 2320 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 DNAL4O96015 105 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 CFDP00746 253 aaPredicted RBP3.53□□□□□ -1.84
SNX13-210ENST00000494402 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 HCP5Q6MZN7 132 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 LINC01600Q96MT4 127 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 NDUFA4L2Q9NRX3 87 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 DOCK2Q92608 1830 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 NCOA2Q15596 1464 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 BAHCC1Q9P281 2608 aa3.53□□□□□ -1.84
SNX13-210ENST00000494402 TRBV25-1A0A075B6N4 114 aa3.52□□□□□ -1.85
SNX13-210ENST00000494402 TRBV6-5A0A0K0K1A5 114 aa3.52□□□□□ -1.85
SNX13-210ENST00000494402 F2Z2F3 143 aa3.52□□□□□ -1.85
SNX13-210ENST00000494402 IGLV3-19P01714 112 aa3.52□□□□□ -1.85
SNX13-210ENST00000494402 ACYP1P07311 99 aa3.52□□□□□ -1.85
SNX13-210ENST00000494402 PRO0461Q9UI25 63 aa3.52□□□□□ -1.85
SNX13-210ENST00000494402 SHROOM3Q8TF72 1996 aa3.52□□□□□ -1.85
SNX13-210ENST00000494402 TRANK1O15050 2925 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 KIAA0100Q14667 2235 aaKnown RBP3.51□□□□□ -1.85
SNX13-210ENST00000494402 INE1O15225 51 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 CCL3L1P16619 93 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 SPATA45Q537H7 98 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 SFTA2Q6UW10 78 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 LINC00322Q6ZN03 302 aaPredicted RBP3.51□□□□□ -1.85
SNX13-210ENST00000494402 DEFB132Q7Z7B7 95 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 PPP1R1CQ8WVI7 109 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 LTBP2Q14767 1821 aa3.51□□□□□ -1.85
SNX13-210ENST00000494402 CTTNBP2Q8WZ74 1663 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 LOC101927531A0A1B0GV80 90 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 H3BUT2 72 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 PPP1R17O96001 155 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 FAM74A4Q5TZK3 123 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 Q86TA4 180 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 FAM223AQ8IWN6 122 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 COX7B2Q8TF08 81 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 V9GYH0 126 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 PRRC2AP48634 2157 aaKnown RBP3.5□□□□□ -1.85
SNX13-210ENST00000494402 MED13Q9UHV7 2174 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 MYO3AQ8NEV4 1616 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 NRXN2Q9P2S2 1712 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 UNC13CQ8NB66 2214 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 PLXNA1Q9UIW2 1896 aa3.5□□□□□ -1.85
SNX13-210ENST00000494402 LRRC37A3O60309 1634 aa3.49□□□□□ -1.85
SNX13-210ENST00000494402 M0R2N4 97 aa3.49□□□□□ -1.85
SNX13-210ENST00000494402 HMGN4O00479 90 aa3.49□□□□□ -1.85
SNX13-210ENST00000494402 RPL37AP61513 92 aaKnown RBP3.49□□□□□ -1.85
SNX13-210ENST00000494402 TMEM170BQ5T4T1 132 aa3.49□□□□□ -1.85
SNX13-210ENST00000494402 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
SNX13-210ENST00000494402 PDE4DIPQ5VU43 2346 aa3.49□□□□□ -1.85
SNX13-210ENST00000494402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNX13-210ENST00000494402 ZC3H13Q5T200 1668 aaKnown RBP3.49□□□□□ -1.85
SNX13-210ENST00000494402 KMT2BQ9UMN6 2715 aaPredicted RBP3.48□□□□□ -1.85
SNX13-210ENST00000494402 SPAG11BQ08648 103 aa3.48□□□□□ -1.85
SNX13-210ENST00000494402 SPAG11AQ6PDA7 123 aa3.48□□□□□ -1.85
SNX13-210ENST00000494402 LINC00643Q86TS7 51 aa3.48□□□□□ -1.85
SNX13-210ENST00000494402 COL4A6Q14031 1691 aa3.48□□□□□ -1.85
SNX13-210ENST00000494402 BAZ2BQ9UIF8 2168 aaKnown RBP3.48□□□□□ -1.85
SNX13-210ENST00000494402 CHD8Q9HCK8 2581 aa3.48□□□□□ -1.85
SNX13-210ENST00000494402 DIP2CQ9Y2E4 1556 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 C18orf32Q8TCD1 76 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 S100ZQ8WXG8 99 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 CDK13Q14004 1512 aaKnown RBP3.47□□□□□ -1.85
SNX13-210ENST00000494402 DLEC1Q9Y238 1755 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 CR1P17927 2039 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 PTPN23Q9H3S7 1636 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 NRXN1Q9ULB1 1477 aa3.47□□□□□ -1.85
SNX13-210ENST00000494402 CFAP74Q9C0B2 1584 aa3.46□□□□□ -1.85
SNX13-210ENST00000494402 UGGT2Q9NYU1 1516 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 IGKV3D-7A0A0C4DH55 119 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 IGKV3OR2-268A0A0C4DH90 116 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 ZNF815PA8K554 130 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 EFNA4P52798 201 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 HMGN3Q15651 99 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 CFAP126Q5VTH2 177 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 TMEM14BQ9NUH8 114 aa3.46□□□□□ -1.86
SNX13-210ENST00000494402 ABCC1P33527 1531 aa3.45□□□□□ -1.86
SNX13-210ENST00000494402 KCPQ6ZWJ8 1503 aa3.45□□□□□ -1.86
SNX13-210ENST00000494402 SAA2P0DJI9 122 aaPredicted RBP3.45□□□□□ -1.86
SNX13-210ENST00000494402 XAF1Q6GPH4 301 aa3.45□□□□□ -1.86
SNX13-210ENST00000494402 R4GMQ9 66 aa3.45□□□□□ -1.86
SNX13-210ENST00000494402 EXPH5Q8NEV8 1989 aa3.45□□□□□ -1.86
SNX13-210ENST00000494402 ALPK2Q86TB3 2170 aa3.45□□□□□ -1.86
SNX13-210ENST00000494402 MYH4Q9Y623 1939 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 RTTNQ86VV8 2226 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 IGKV2-40A0A087WW87 121 aaPredicted RBP3.44□□□□□ -1.86
SNX13-210ENST00000494402 LOC110117498A0A087WWA1 95 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 NBDYA0A0U1RRE5 68 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 IGKV2D-40P01614 121 aaPredicted RBP3.44□□□□□ -1.86
SNX13-210ENST00000494402 IL9P15248 144 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 PSMG4Q5JS54 123 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 HEPN1Q6WQI6 88 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 Q6ZRN7 208 aaPredicted RBP3.44□□□□□ -1.86
SNX13-210ENST00000494402 AMELXQ99217 191 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 SNURFQ9Y675 71 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms