RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TCRAP04437 139 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 GIPP09681 153 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-219ENST00000494323 LINC00694P0DN24 101 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 S100A4P26447 101 aaKnown RBP3.29□□□□□ -1.88
PTCD3-219ENST00000494323 RPL12P30050 165 aaKnown RBP3.29□□□□□ -1.88
PTCD3-219ENST00000494323 FGF8P55075 233 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-219ENST00000494323 RAB2AP61019 212 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 ZFP2Q6ZN57 461 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 OR10G9Q8NGN4 311 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 OR2G3Q8NGZ4 309 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 PPP1R1CQ8WVI7 109 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 DPH3Q96FX2 82 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 NDFIP1Q9BT67 221 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 SH3BGRL3Q9H299 93 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 A0A087WX48 190 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 GRIFINA4D1Z8 144 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 A8MWV9 139 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 PANO1I0J062 215 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 PET100P0DJ07 73 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 ARL14EPLP0DKL9 152 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 MT1HL1P0DM35 61 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 H2BFSP57053 126 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 SEC61GP60059 68 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 FLI1Q01543 452 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-219ENST00000494323 Q1RN00 199 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 SMUG1Q53HV7 270 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 FAM74A4Q5TZK3 123 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 ENHOQ6UWT2 76 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 PTH2Q96A98 100 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 EPDR1Q9UM22 224 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 HSPB11Q9Y547 144 aa3.28□□□□□ -1.88
PTCD3-219ENST00000494323 FABP5P3A8MUU1 101 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 H3BVH4 76 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 M0R036 132 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 MPC2O95563 127 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 ARMS2P0C7Q2 107 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 SEC11BP0C7V7 166 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 ASIPP42127 132 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 CRIP1P50238 77 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 Q0VG73 95 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 ELOBQ15370 118 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 SAPCD1Q5SSQ6 148 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 SDIM1Q6ZPB5 146 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 C5orf17Q8NAS9 161 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 RPS10P5Q9NQ39 176 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 FAT3Q8TDW7 4589 aa3.27□□□□□ -1.89
PTCD3-219ENST00000494323 TRBV7-3A0A075B6L6 115 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 TMSB15BA0A087X1C1 80 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 A0A1B0GWB2 263 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 B4DEV8 164 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 KRBOX1C9JBD0 128 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 M0R381 172 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 HLA-DQA1P01909 254 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 ANGP03950 147 aaKnown RBP3.26□□□□□ -1.89
PTCD3-219ENST00000494323 STAG3L2P0CL84 134 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 STAG3L3P0CL85 134 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 GCHFRP30047 84 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 CDC34P49427 236 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-219ENST00000494323 C2orf66Q6UXQ4 117 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 HSD17B11Q8NBQ5 300 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 SFRP2Q96HF1 295 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 IL36BQ9NZH7 164 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 ARL2-SNX15V9GYD0 113 aa3.26□□□□□ -1.89
PTCD3-219ENST00000494323 TRBV6-8A0A0A6YYG3 113 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 A0A0D9SG52 128 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 HMSDA8MTL9 139 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 IFNA7P01567 189 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 CRPP02741 224 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 RAB5CP51148 216 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 UBE2G2P60604 165 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 UBE2D3P61077 147 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 UBE2D2P62837 147 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 RPL32P62910 135 aaKnown RBP3.25□□□□□ -1.89
PTCD3-219ENST00000494323 ZNF345Q14585 488 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 NDUFA5Q16718 116 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 MPV17L2Q567V2 206 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 CLPSL2Q6UWE3 100 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 Q6ZRU5 148 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 LINC00269Q8N2A0 174 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 C9orf163Q8N9P6 203 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 SUN5Q8TC36 379 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 ZC2HC1AQ96GY0 325 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 DPH3P1Q9H4G8 78 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 PHLDA3Q9Y5J5 127 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
PTCD3-219ENST00000494323 IGLV10-54A0A075B6I4 117 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 MUC21A0A0G2JKD1 596 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 MUC21A0A140T8X8 626 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 H0Y8G0 127 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 SH2D1AO60880 128 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 CXorf1O96002 111 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 CHTF8P0CG12 524 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 TPT1P13693 172 aaKnown RBP3.24□□□□□ -1.89
PTCD3-219ENST00000494323 ATP6V0CP27449 155 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 EIF5AP63241 154 aaKnown RBP3.24□□□□□ -1.89
PTCD3-219ENST00000494323 PRR4Q16378 134 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 DNLZQ5SXM8 178 aa3.24□□□□□ -1.89
PTCD3-219ENST00000494323 UQCC3Q6UW78 93 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms