RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 A0A0J9YXV3 536 aa7□□□□□ -1.29
NPHP3-209ENST00000493732 IGHV3-30P01768 117 aa7□□□□□ -1.29
NPHP3-209ENST00000493732 IGHV3-30-5P0DP03 117 aa7□□□□□ -1.29
NPHP3-209ENST00000493732 RPL24P83731 157 aaKnown RBP7□□□□□ -1.29
NPHP3-209ENST00000493732 OPRPNQ99935 248 aaPredicted RBP7□□□□□ -1.29
NPHP3-209ENST00000493732 C1QTNF4Q9BXJ3 329 aa7□□□□□ -1.29
NPHP3-209ENST00000493732 YAE1D1Q9NRH1 226 aa7□□□□□ -1.29
NPHP3-209ENST00000493732 XCL2Q9UBD3 114 aa7□□□□□ -1.29
NPHP3-209ENST00000493732 ZFHX3Q15911 3703 aa7□□□□□ -1.29
NPHP3-209ENST00000493732 SORL1Q92673 2214 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 TRBV20-1A0A075B6N2 111 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.99□□□□□ -1.29
NPHP3-209ENST00000493732 AZU1P20160 251 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 GAGE13Q4V321 117 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 TMEM263Q8WUH6 116 aaKnown RBP6.99□□□□□ -1.29
NPHP3-209ENST00000493732 CHCHD7Q9BUK0 85 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 UBE2D4Q9Y2X8 147 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 A0A1W2PRX2 142 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 PROK1P58294 105 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 TSPEAR-AS2P59090 65 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 RPL36AP83881 106 aaKnown RBP6.99□□□□□ -1.29
NPHP3-209ENST00000493732 NDUFA11Q86Y39 141 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 C1orf158Q8N1D5 194 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 LINC01006Q8NI28 216 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 IL17DQ8TAD2 202 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 RPL36ALQ969Q0 106 aaKnown RBP6.99□□□□□ -1.29
NPHP3-209ENST00000493732 CITED2Q99967 270 aaPredicted RBP6.99□□□□□ -1.29
NPHP3-209ENST00000493732 ESM1Q9NQ30 184 aa6.99□□□□□ -1.29
NPHP3-209ENST00000493732 IGHV1-58A0A0C4DH39 117 aa6.98□□□□□ -1.29
NPHP3-209ENST00000493732 J3QKU1 62 aa6.98□□□□□ -1.29
NPHP3-209ENST00000493732 DAZ2Q13117 558 aaKnown RBP6.98□□□□□ -1.29
NPHP3-209ENST00000493732 DGAT2L7PQ6IED9 249 aa6.98□□□□□ -1.29
NPHP3-209ENST00000493732 DAZ4Q86SG3 579 aaKnown RBP6.98□□□□□ -1.29
NPHP3-209ENST00000493732 DAZ3Q9NR90 486 aaKnown RBP6.98□□□□□ -1.29
NPHP3-209ENST00000493732 PRO1854Q9UHT4 67 aa6.98□□□□□ -1.29
NPHP3-209ENST00000493732 TRAV4A0A0B4J268 109 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 H3BMG7 143 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 NDUFA7O95182 113 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 APOMO95445 188 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 TIRAPP58753 221 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 Q6ZSN1 163 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 C10orf126Q8N4M7 172 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 GEMIN7Q9H840 131 aaKnown RBP6.97□□□□□ -1.29
NPHP3-209ENST00000493732 ABCA12Q86UK0 2595 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 ZANQ9Y493 2812 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 TRGV1A0A0A0MS02 117 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 SAP30O75446 220 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 TSPAN13O95857 204 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 UBE2D3P61077 147 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 UBE2D2P62837 147 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 C16orf74Q96GX8 76 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
NPHP3-209ENST00000493732 MYO9AB2RTY4 2548 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
NPHP3-209ENST00000493732 TEX15Q9BXT5 2789 aa6.96□□□□□ -1.29
NPHP3-209ENST00000493732 IGHV3OR16-12A0A075B7B8 117 aa6.96□□□□□ -1.3
NPHP3-209ENST00000493732 IGLV1-51P01701 117 aa6.96□□□□□ -1.3
NPHP3-209ENST00000493732 HILS1P60008 231 aa6.96□□□□□ -1.3
NPHP3-209ENST00000493732 KRTAP1-1Q07627 177 aa6.96□□□□□ -1.3
NPHP3-209ENST00000493732 C11orf44Q8N8P7 122 aa6.96□□□□□ -1.3
NPHP3-209ENST00000493732 CENPEQ02224 2701 aa6.96□□□□□ -1.3
NPHP3-209ENST00000493732 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 K7EQD1 137 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 PRM2P04554 102 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 CFC1BP0CG36 223 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 CFC1P0CG37 223 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 HERVK_113P63121 156 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 FAM104AQ969W3 186 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 RNF183Q96D59 192 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-209ENST00000493732 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-209ENST00000493732 TIMM17BO60830 172 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 ATP6V0E2Q8NHE4 81 aa6.95□□□□□ -1.3
NPHP3-209ENST00000493732 IGLV5-45A0A087WSX0 123 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 A4D1N5 150 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 PLA2G2AP14555 144 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 WFDC2Q14508 124 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 SPANXDQ9BXN6 97 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 SPANXCQ9NY87 97 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 NDUFA12Q9UI09 145 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
NPHP3-209ENST00000493732 NACAE9PAV3 2078 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 IGHV3-64A0A075B6Q5 118 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 H7C423 109 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
NPHP3-209ENST00000493732 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 CEMP1Q6PRD7 247 aaPredicted RBP6.93□□□□□ -1.3
NPHP3-209ENST00000493732 Q6ZUT4 128 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 GTSF1LQ9H1H1 148 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 PRO0461Q9UI25 63 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 APCP25054 2843 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms