RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, human

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-215	ENST00000493220	MDFIC	Q9P1T7	246 aa		4.65	□□□□□ -1.67
NF1-215	ENST00000493220		H7C423	109 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	NDUFS5	O43920	106 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	GDF5OS	Q5U4N7	250 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	HIVEP2	P31629	2446 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	hADV29S1	A0JD25	119 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	KLLN	B2CW77	178 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	ODF3L2	Q3SX64	289 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	FAM208B	Q5VWN6	2430 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	IGKV2D-24	A0A075B6R9	120 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	TRAV12-1	A0A0B4J245	112 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	KRTAP1-1	Q07627	177 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	C14orf177	Q52M58	125 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	DSCR8	Q96T75	97 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	CENPF	P49454	3210 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	PRSS29P	A6NIE9	313 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	BEAN1	Q3B7T3	259 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	ZFAND2A	Q8N6M9	145 aa		4.64	□□□□□ -1.67
NF1-215	ENST00000493220	MRPS12	O15235	138 aa	Known RBP	4.63	□□□□□ -1.67
NF1-215	ENST00000493220	TRBV6-4	A0A1B0GX49	114 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220		K7EP34	96 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	NPY	P01303	97 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220		P0DMU3	169 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	FAM231A	P0DMU4	169 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	FAM231C	P0DMU5	169 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	FGF6	P10767	208 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220		Q6ZQT7	251 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220		Q6ZTI0	123 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220		A0A0J9YWU9	116 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	UBE2B	P63146	152 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	LINC01620	Q4KN68	170 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	TP53TG3	Q9ULZ0	132 aa		4.63	□□□□□ -1.67
NF1-215	ENST00000493220	WFDC10A	Q9H1F0	79 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	NDUFA12	Q9UI09	145 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	TNRC18	O15417	2968 aa	Predicted RBP	4.62	□□□□□ -1.67
NF1-215	ENST00000493220	NFE4	Q86UQ8	179 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	IGHV3-30	P01768	117 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	IGHV3-33	P01772	117 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	IGHV3-30-3	P0DP02	117 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	IGHV3-30-5	P0DP03	117 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	C18orf32	Q8TCD1	76 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	ROS1	P08922	2347 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220		F8W1H4	67 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	ZNF80	P51504	273 aa	Predicted RBP	4.62	□□□□□ -1.67
NF1-215	ENST00000493220	NDUFV3	P56181	108 aa	Known RBP	4.62	□□□□□ -1.67
NF1-215	ENST00000493220	TDRG1	Q3Y452	100 aa		4.62	□□□□□ -1.67
NF1-215	ENST00000493220	CFAP126	Q5VTH2	177 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	CCDC179	H3BU77	68 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	IGLC6	P0CF74	106 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	CLPSL2	Q6UWE3	100 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	AMTN	Q6UX39	209 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	PPDPFL	Q8WWR9	84 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	PRRC2A	P48634	2157 aa	Known RBP	4.61	□□□□□ -1.67
NF1-215	ENST00000493220	GTSF1	Q8WW33	167 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	NOTCH3	Q9UM47	2321 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	TRAV13-2	A0A0B4J235	113 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	IGLV2-11	P01706	119 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	PRB2	P02812	416 aa	Predicted RBP	4.61	□□□□□ -1.67
NF1-215	ENST00000493220	DEFB105A	Q8NG35	78 aa		4.61	□□□□□ -1.67
NF1-215	ENST00000493220	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.6	□□□□□ -1.67
NF1-215	ENST00000493220	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.6	□□□□□ -1.67
NF1-215	ENST00000493220		H3BMG7	143 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	CXCL5	P42830	114 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220		A0A0A0MQY5	61 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	FAM236A	A0A1B0GUQ0	79 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	FAM236B	A0A1B0GV22	79 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	IGLV2-8	P01709	118 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	ETDB	Q3ZM63	59 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	VSIG2	Q96IQ7	327 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	CARD19	Q96LW7	228 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	C9orf85	Q96MD7	179 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	NDUFC2-KCTD14	E9PQ53	114 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	WFDC9	Q8NEX5	89 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	RPL39L	Q96EH5	51 aa	Known RBP	4.6	□□□□□ -1.67
NF1-215	ENST00000493220		Q9HAA7	133 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	DOCK11	Q5JSL3	2073 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	LOC107984640	A0A0U1RRK4	108 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	RBM3	P98179	157 aa	Known RBP	4.6	□□□□□ -1.67
NF1-215	ENST00000493220	PRO1854	Q9UHT4	67 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	NBAS	A2RRP1	2371 aa		4.6	□□□□□ -1.67
NF1-215	ENST00000493220	TET2	Q6N021	2002 aa	Predicted RBP	4.59	□□□□□ -1.67
NF1-215	ENST00000493220	C9orf118	A6NHY6	69 aa		4.59	□□□□□ -1.67
NF1-215	ENST00000493220	RNASE13	Q5GAN3	156 aa	Known RBP	4.59	□□□□□ -1.67
NF1-215	ENST00000493220	LINC01561	Q8N1V8	128 aa		4.59	□□□□□ -1.67
NF1-215	ENST00000493220	PRR14L	Q5THK1	2151 aa		4.59	□□□□□ -1.67
NF1-215	ENST00000493220	COX7A2L	O14548	114 aa		4.59	□□□□□ -1.67
NF1-215	ENST00000493220	GATA1	P15976	413 aa	Predicted RBP	4.59	□□□□□ -1.68
NF1-215	ENST00000493220	XCL1	P47992	114 aa		4.59	□□□□□ -1.68
NF1-215	ENST00000493220	EIF4EBP3	O60516	100 aa	Predicted RBP	4.59	□□□□□ -1.68
NF1-215	ENST00000493220	CRYGD	P07320	174 aa		4.59	□□□□□ -1.68
NF1-215	ENST00000493220	MRPL35	Q9NZE8	188 aa	Known RBP	4.59	□□□□□ -1.68
NF1-215	ENST00000493220	SPTAN1	Q13813	2472 aa	Known RBP	4.58	□□□□□ -1.68
NF1-215	ENST00000493220	CHKB-CPT1B	H3BT56	60 aa		4.58	□□□□□ -1.68
NF1-215	ENST00000493220	NANOS2	P60321	138 aa	Known RBP	4.58	□□□□□ -1.68
NF1-215	ENST00000493220	MSRB1	Q9NZV6	116 aa		4.58	□□□□□ -1.68
NF1-215	ENST00000493220		J3QQQ9	107 aa		4.58	□□□□□ -1.68
NF1-215	ENST00000493220	TOMM6	Q96B49	74 aa		4.58	□□□□□ -1.68
NF1-215	ENST00000493220	SMIM26	A0A096LP01	95 aa		4.58	□□□□□ -1.68
NF1-215	ENST00000493220	KPRP	Q5T749	579 aa	Predicted RBP	4.58	□□□□□ -1.68
NF1-215	ENST00000493220	PLCE1	Q9P212	2302 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms