RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 URGCP-MRPS24S4R325 110 aa10.17□□□□□ -0.78
CDC42SE1-205ENST00000491825 TRBV24-1A0A075B6N3 115 aa10.16□□□□□ -0.78
CDC42SE1-205ENST00000491825 SDHAF1A6NFY7 115 aa10.16□□□□□ -0.78
CDC42SE1-205ENST00000491825 NCR2O95944 276 aa10.16□□□□□ -0.78
CDC42SE1-205ENST00000491825 IQCJQ1A5X6 159 aa10.16□□□□□ -0.78
CDC42SE1-205ENST00000491825 ST20Q9HBF5 79 aa10.16□□□□□ -0.78
CDC42SE1-205ENST00000491825 TRBV27A0A0K0K1C4 114 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 D6R8Y8 96 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 CKS2P33552 79 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 COX19Q49B96 90 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 TMEM136Q6ZRR5 245 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 NTM-AS1Q6ZSK4 140 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 Q8N1X5 172 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 TMEM70Q9BUB7 260 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 CHCHD7Q9BUK0 85 aa10.15□□□□□ -0.78
CDC42SE1-205ENST00000491825 TRBV25-1A0A075B6N4 114 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 PHOX2AO14813 284 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 SUMO2P61956 95 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 COTL1Q14019 142 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 NIT1Q86X76 327 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 ORMDL3Q8N138 153 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 C10orf126Q8N4M7 172 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 C20orf78Q9BR46 151 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 GNB1LQ9BYB4 327 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 LAMTOR2Q9Y2Q5 125 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 FAT1Q14517 4588 aa10.14□□□□□ -0.79
CDC42SE1-205ENST00000491825 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 IGHV1-24A0A0C4DH33 117 aa10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 I3L3M4 83 aa10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 PKIAP61925 76 aa10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 RPL32P62910 135 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 ELOBQ15370 118 aa10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 ATRAIDQ6UW56 229 aa10.13□□□□□ -0.79
CDC42SE1-205ENST00000491825 TNFRSF6BO95407 300 aa10.12□□□□□ -0.79
CDC42SE1-205ENST00000491825 MT-ND6P03923 174 aa10.12□□□□□ -0.79
CDC42SE1-205ENST00000491825 YPEL4Q96NS1 127 aa10.11□□□□□ -0.79
CDC42SE1-205ENST00000491825 VCYO14598 125 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 TSHBP01222 138 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 NPYP01303 97 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 AMTP48728 403 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 LAGE3Q14657 143 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 PRELID3AQ96N28 172 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 TMEM243Q9BU79 118 aa10.1□□□□□ -0.79
CDC42SE1-205ENST00000491825 A0A087WX48 190 aa10.09□□□□□ -0.79
CDC42SE1-205ENST00000491825 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
CDC42SE1-205ENST00000491825 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
CDC42SE1-205ENST00000491825 APCSP02743 223 aa10.09□□□□□ -0.79
CDC42SE1-205ENST00000491825 PMCHP20382 165 aa10.09□□□□□ -0.79
CDC42SE1-205ENST00000491825 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
CDC42SE1-205ENST00000491825 SMCO4Q9NRQ5 59 aa10.09□□□□□ -0.79
CDC42SE1-205ENST00000491825 IBA57-AS1B1ANH7 110 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 H7C423 109 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 TCAPO15273 167 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 IGHV3-30P01768 117 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 IGHV3-30-5P0DP03 117 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 Q8N3U1 123 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 HERC1Q15751 4861 aa10.08□□□□□ -0.8
CDC42SE1-205ENST00000491825 ESDP10768 282 aa10.07□□□□□ -0.8
CDC42SE1-205ENST00000491825 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
CDC42SE1-205ENST00000491825 A0A1B0GUV1 79 aa10.06□□□□□ -0.8
CDC42SE1-205ENST00000491825 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
CDC42SE1-205ENST00000491825 UBE2L6O14933 153 aa10.06□□□□□ -0.8
CDC42SE1-205ENST00000491825 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
CDC42SE1-205ENST00000491825 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-205ENST00000491825 FCER1GP30273 86 aa10.05□□□□□ -0.8
CDC42SE1-205ENST00000491825 RBX1P62877 108 aa10.05□□□□□ -0.8
CDC42SE1-205ENST00000491825 GAGE6Q13070 117 aa10.05□□□□□ -0.8
CDC42SE1-205ENST00000491825 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
CDC42SE1-205ENST00000491825 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
CDC42SE1-205ENST00000491825 FUSP35637 526 aaKnown RBP eCLIP10.04□□□□□ -0.81e-7■□□□□ 9.3
CDC42SE1-205ENST00000491825 Q8N976 141 aa10.04□□□□□ -0.8
CDC42SE1-205ENST00000491825 TRAV8-3A0A0A6YYJ7 113 aa10.03□□□□□ -0.8
CDC42SE1-205ENST00000491825 K7EMI3 77 aa10.03□□□□□ -0.8
CDC42SE1-205ENST00000491825 ZNF25P17030 456 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-205ENST00000491825 KIAA1644Q3SXP7 199 aa10.03□□□□□ -0.8
CDC42SE1-205ENST00000491825 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
CDC42SE1-205ENST00000491825 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-205ENST00000491825 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
CDC42SE1-205ENST00000491825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 A0A087WTM6 91 aa10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 FABP9Q0Z7S8 132 aa10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 NXT2Q9NPJ8 142 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 PRR34Q9NV39 138 aa10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 KLK12Q9UKR0 248 aa10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
CDC42SE1-205ENST00000491825 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
CDC42SE1-205ENST00000491825 ANGP03950 147 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-205ENST00000491825 FGF6P10767 208 aa10.01□□□□□ -0.81
CDC42SE1-205ENST00000491825 XGP55808 180 aa10.01□□□□□ -0.81
CDC42SE1-205ENST00000491825 Q0VG73 95 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms