RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 HLA-DQA1P01909 254 aa11.11□□□□□ -0.63
PBX3-209ENST00000491787 NKX2-5P52952 324 aaPredicted RBP11.11□□□□□ -0.63
PBX3-209ENST00000491787 SDIM1Q6ZPB5 146 aa11.11□□□□□ -0.63
PBX3-209ENST00000491787 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
PBX3-209ENST00000491787 LYPD6BQ8NI32 183 aa11.11□□□□□ -0.63
PBX3-209ENST00000491787 A0A1B0GUV1 79 aa11.1□□□□□ -0.63
PBX3-209ENST00000491787 CLRN3Q8NCR9 226 aa11.1□□□□□ -0.63
PBX3-209ENST00000491787 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
PBX3-209ENST00000491787 RNASE7Q9H1E1 156 aaKnown RBP11.1□□□□□ -0.63
PBX3-209ENST00000491787 NDUFS6O75380 124 aaKnown RBP11.09□□□□□ -0.63
PBX3-209ENST00000491787 RPL37AP61513 92 aaKnown RBP11.09□□□□□ -0.63
PBX3-209ENST00000491787 TWIST1Q15672 202 aa11.09□□□□□ -0.63
PBX3-209ENST00000491787 ALKAL2Q6UX46 152 aa11.09□□□□□ -0.63
PBX3-209ENST00000491787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.09□□□□□ -0.63
PBX3-209ENST00000491787 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
PBX3-209ENST00000491787 FAM231DQ6ZW35 169 aa11.08□□□□□ -0.64
PBX3-209ENST00000491787 C20orf203Q8NBC4 194 aa11.08□□□□□ -0.64
PBX3-209ENST00000491787 TRAV8-4A0A0B4J246 113 aa11.07□□□□□ -0.64
PBX3-209ENST00000491787 PANO1I0J062 215 aa11.07□□□□□ -0.64
PBX3-209ENST00000491787 HNRNPA3P51991 378 aaKnown RBP11.07□□□□□ -0.64
PBX3-209ENST00000491787 CNBPP62633 177 aaKnown RBP11.07□□□□□ -0.64
PBX3-209ENST00000491787 REG3AQ06141 175 aa11.07□□□□□ -0.64
PBX3-209ENST00000491787 COTL1Q14019 142 aa11.07□□□□□ -0.64
PBX3-209ENST00000491787 CLPSL2Q6UWE3 100 aa11.07□□□□□ -0.64
PBX3-209ENST00000491787 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
PBX3-209ENST00000491787 hCG_2014768A0A024R1R8 64 aa11.06□□□□□ -0.64
PBX3-209ENST00000491787 CT83Q5H943 113 aa11.06□□□□□ -0.64
PBX3-209ENST00000491787 TEX261Q6UWH6 196 aa11.06□□□□□ -0.64
PBX3-209ENST00000491787 GTSF1Q8WW33 167 aa11.06□□□□□ -0.64
PBX3-209ENST00000491787 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
PBX3-209ENST00000491787 A8MWL6 223 aa11.05□□□□□ -0.64
PBX3-209ENST00000491787 UBE2L6O14933 153 aa11.05□□□□□ -0.64
PBX3-209ENST00000491787 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
PBX3-209ENST00000491787 GATD1Q8NB37 220 aa11.05□□□□□ -0.64
PBX3-209ENST00000491787 IGLV4-60A0A075B6I1 120 aa11.04□□□□□ -0.64
PBX3-209ENST00000491787 AMTP48728 403 aa11.04□□□□□ -0.64
PBX3-209ENST00000491787 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
PBX3-209ENST00000491787 NCR2O95944 276 aa11.03□□□□□ -0.64
PBX3-209ENST00000491787 SLPIP03973 132 aa11.03□□□□□ -0.64
PBX3-209ENST00000491787 GFRA4Q9GZZ7 299 aa11.03□□□□□ -0.64
PBX3-209ENST00000491787 IGLV10-54A0A075B6I4 117 aa11.02□□□□□ -0.65
PBX3-209ENST00000491787 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
PBX3-209ENST00000491787 FAM210AQ96ND0 272 aa11.01□□□□□ -0.65
PBX3-209ENST00000491787 SMIM7Q9BQ49 75 aa11.01□□□□□ -0.65
PBX3-209ENST00000491787 EIF5A2Q9GZV4 153 aaKnown RBP11.01□□□□□ -0.65
PBX3-209ENST00000491787 hDV102S1A0JD36 115 aa11□□□□□ -0.65
PBX3-209ENST00000491787 FAM231BA6NCW3 169 aa11□□□□□ -0.65
PBX3-209ENST00000491787 H7C423 109 aa11□□□□□ -0.65
PBX3-209ENST00000491787 MT1HL1P0DM35 61 aa11□□□□□ -0.65
PBX3-209ENST00000491787 CEBPGP53567 150 aa11□□□□□ -0.65
PBX3-209ENST00000491787 LINC01551Q86U37 167 aa11□□□□□ -0.65
PBX3-209ENST00000491787 BORCS7Q96B45 105 aa11□□□□□ -0.65
PBX3-209ENST00000491787 RNF185Q96GF1 192 aa11□□□□□ -0.65
PBX3-209ENST00000491787 Q6ZRU5 148 aa10.99□□□□□ -0.65
PBX3-209ENST00000491787 TSKUQ8WUA8 353 aa10.99□□□□□ -0.65
PBX3-209ENST00000491787 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
PBX3-209ENST00000491787 PLA2G2DQ9UNK4 145 aa10.99□□□□□ -0.65
PBX3-209ENST00000491787 TNXBP22105 4242 aa10.98□□□□□ -0.65
PBX3-209ENST00000491787 IGHV3-64A0A075B6Q5 118 aa10.98□□□□□ -0.65
PBX3-209ENST00000491787 TRBV6-5A0A0K0K1A5 114 aa10.98□□□□□ -0.65
PBX3-209ENST00000491787 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
PBX3-209ENST00000491787 A0A1B0GUT8 65 aa10.97□□□□□ -0.65
PBX3-209ENST00000491787 SDHAF1A6NFY7 115 aa10.97□□□□□ -0.65
PBX3-209ENST00000491787 ZNF727A8MUV8 499 aa10.97□□□□□ -0.65
PBX3-209ENST00000491787 APCSP02743 223 aa10.97□□□□□ -0.65
PBX3-209ENST00000491787 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
PBX3-209ENST00000491787 AP5S1Q9NUS5 200 aa10.97□□□□□ -0.65
PBX3-209ENST00000491787 A0A087WYN8 130 aa10.96□□□□□ -0.65
PBX3-209ENST00000491787 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.65
PBX3-209ENST00000491787 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
PBX3-209ENST00000491787 I3L3M4 83 aa10.96□□□□□ -0.65
PBX3-209ENST00000491787 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
PBX3-209ENST00000491787 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.65
PBX3-209ENST00000491787 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.65
PBX3-209ENST00000491787 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
PBX3-209ENST00000491787 CFAP161Q6P656 301 aa10.95□□□□□ -0.66
PBX3-209ENST00000491787 C15orf56Q8N910 161 aa10.95□□□□□ -0.66
PBX3-209ENST00000491787 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
PBX3-209ENST00000491787 CHTF8P0CG12 524 aa10.94□□□□□ -0.66
PBX3-209ENST00000491787 FAM74A3Q4VXF1 159 aa10.94□□□□□ -0.66
PBX3-209ENST00000491787 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
PBX3-209ENST00000491787 FGF6P10767 208 aa10.93□□□□□ -0.66
PBX3-209ENST00000491787 PMCHP20382 165 aa10.93□□□□□ -0.66
PBX3-209ENST00000491787 RNASEKQ6P5S7 137 aaKnown RBP10.93□□□□□ -0.66
PBX3-209ENST00000491787 ST20Q9HBF5 79 aa10.93□□□□□ -0.66
PBX3-209ENST00000491787 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.92□□□□□ -0.66
PBX3-209ENST00000491787 IGKV2-29A2NJV5 120 aaPredicted RBP10.92□□□□□ -0.66
PBX3-209ENST00000491787 GAGE12HA6NDE8 117 aa10.92□□□□□ -0.66
PBX3-209ENST00000491787 V9GYV3 84 aa10.92□□□□□ -0.66
PBX3-209ENST00000491787 ESDP10768 282 aa10.91□□□□□ -0.66
PBX3-209ENST00000491787 RAB4AP20338 218 aa10.91□□□□□ -0.66
PBX3-209ENST00000491787 RIGQ13278 110 aa10.91□□□□□ -0.66
PBX3-209ENST00000491787 TMEM241Q24JQ0 296 aa10.91□□□□□ -0.66
PBX3-209ENST00000491787 CHCHD10Q8WYQ3 142 aaPredicted RBP10.91□□□□□ -0.66
PBX3-209ENST00000491787 ISOC2Q96AB3 205 aa10.91□□□□□ -0.66
PBX3-209ENST00000491787 BTF3L4Q96K17 158 aa10.91□□□□□ -0.66
PBX3-209ENST00000491787 TRBV27A0A0K0K1C4 114 aa10.9□□□□□ -0.66
PBX3-209ENST00000491787 PPP1R17O96001 155 aa10.9□□□□□ -0.66
PBX3-209ENST00000491787 TSHBP01222 138 aa10.9□□□□□ -0.66
PBX3-209ENST00000491787 RPS10P46783 165 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms