RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 KCNIP4Q6PIL6 250 aa5.46□□□□□ -1.54
APOBEC3F-204ENST00000491387 ENHOQ6UWT2 76 aa5.46□□□□□ -1.54
APOBEC3F-204ENST00000491387 ZFP82Q8N141 532 aa5.46□□□□□ -1.54
APOBEC3F-204ENST00000491387 UBE2WQ96B02 151 aa5.46□□□□□ -1.54
APOBEC3F-204ENST00000491387 SMIM12Q96EX1 92 aa5.46□□□□□ -1.54
APOBEC3F-204ENST00000491387 IMMP2LQ96T52 175 aa5.46□□□□□ -1.54
APOBEC3F-204ENST00000491387 KIF25-AS1Q9Y6Z4 181 aa5.46□□□□□ -1.54
APOBEC3F-204ENST00000491387 TRBV7-3A0A075B6L6 115 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 LOC105371267A0A1B0GV96 52 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 RPS10P46783 165 aaKnown RBP5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 RAB5BP61020 215 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 MPV17L2Q567V2 206 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 CLPSL2Q6UWE3 100 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 NTM-AS1Q6ZSK4 140 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 DAZAP1Q96EP5 407 aaKnown RBP5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 BTF3L4Q96K17 158 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 OSTCQ9NRP0 149 aa5.45□□□□□ -1.54
APOBEC3F-204ENST00000491387 TNXBP22105 4242 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 TRBV6-8A0A0A6YYG3 113 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 C19orf71A6NCJ1 209 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 IGLC6P0CF74 106 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 HNRNPA3P51991 378 aaKnown RBP5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 PKIAP61925 76 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 RPL36AP83881 106 aaKnown RBP5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 CIRBPQ14011 172 aaKnown RBP5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 FAM231DQ6ZW35 169 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 RPL36ALQ969Q0 106 aaKnown RBP5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 TPPP3Q9BW30 176 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 SSBP4Q9BWG4 385 aaPredicted RBP5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 BIN3Q9NQY0 253 aa5.44□□□□□ -1.54
APOBEC3F-204ENST00000491387 TRAV9-1A0A075B6T8 112 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 USP17L23D6RBM5 183 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 MGPP08493 103 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 MIAQ16674 131 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 SPANXN1Q5VSR9 72 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 KRTAP26-1Q6PEX3 210 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 SDIM1Q6ZPB5 146 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 Q6ZRU5 148 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 RNASE7Q9H1E1 156 aaKnown RBP5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 PRR34Q9NV39 138 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 V9GYV3 84 aa5.43□□□□□ -1.54
APOBEC3F-204ENST00000491387 F5H697 171 aa5.42□□□□□ -1.54
APOBEC3F-204ENST00000491387 GATCO43716 136 aaKnown RBP5.42□□□□□ -1.54
APOBEC3F-204ENST00000491387 PRSS1P07477 247 aa5.42□□□□□ -1.54
APOBEC3F-204ENST00000491387 OR5AL1P0C617 328 aa5.42□□□□□ -1.54
APOBEC3F-204ENST00000491387 RAB4BP61018 213 aa5.42□□□□□ -1.54
APOBEC3F-204ENST00000491387 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
APOBEC3F-204ENST00000491387 OR2D3Q8NGH3 330 aa5.42□□□□□ -1.54
APOBEC3F-204ENST00000491387 CRPP02741 224 aa5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 TRGC2P03986 189 aa5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 GAGE6Q13070 117 aa5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 TMEM97Q5BJF2 176 aa5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 NUDT11Q96G61 164 aa5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 GFRA4Q9GZZ7 299 aa5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.41□□□□□ -1.54
APOBEC3F-204ENST00000491387 TRAV26-2A0A0B4J265 109 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 SMIM27A0A1W2PRY6 76 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 TMEM262E9PQX1 116 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 P01737 135 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 HLA-DQA1P01909 254 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 ANGP03950 147 aaKnown RBP5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 S100A6P06703 90 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 FOXA3P55318 350 aaPredicted RBP5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 CNBPP62633 177 aaKnown RBP5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 CT83Q5H943 113 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 LYZL1Q6UWQ5 148 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 FER1L6-AS1Q8NA97 138 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 AP1S3Q96PC3 154 aa5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 RPP21Q9H633 154 aaKnown RBP5.4□□□□□ -1.54
APOBEC3F-204ENST00000491387 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 PANO1I0J062 215 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 M0QY20 66 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 PHOX2AO14813 284 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 GAS8-AS1O95177 125 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 TRGC1P0CF51 173 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 COX19Q49B96 90 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 TSKUQ8WUA8 353 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 GTSF1Q8WW33 167 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 RNF185Q96GF1 192 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 CHCHD5Q9BSY4 110 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 NAT8BQ9UHF3 227 aa5.39□□□□□ -1.55
APOBEC3F-204ENST00000491387 LRP2P98164 4655 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 IGLV10-54A0A075B6I4 117 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 C5orf52A6NGY3 159 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 A8MWL6 223 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 NTF3P20783 257 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 SNRPEP62304 92 aaKnown RBP5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 RBX1P62877 108 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms