RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 NFE4Q86UQ8 179 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 POM121L12Q8N7R1 296 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 SPANXB1Q9NS25 103 aaPredicted RBP5.39□□□□□ -1.55
NPHP3-208ENST00000490993 TNRC18O15417 2968 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-208ENST00000490993 TMEM223A0PJW6 202 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 P0DMU3 169 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 FAM231AP0DMU4 169 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 FAM231CP0DMU5 169 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 GYPEP15421 78 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 IGKV2D-26A0A0A0MRZ7 120 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 IGIPA6NJ69 53 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 LYRM9A8MSI8 78 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 CREBBPQ92793 2442 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 IGLV1-51P01701 117 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 CFC1BP0CG36 223 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 CFC1P0CG37 223 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 OPRPNQ99935 248 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-208ENST00000490993 PRUNE2Q8WUY3 3088 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 KIF25-AS1Q9Y6Z4 181 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 NAV2Q8IVL1 2488 aa5.38□□□□□ -1.55
NPHP3-208ENST00000490993 INAFM1C9JVW0 142 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 GHRHP01286 108 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 MRPL23Q16540 153 aaKnown RBP5.37□□□□□ -1.55
NPHP3-208ENST00000490993 Q9H8V8 135 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 IGHV3-30-3P0DP02 117 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 TIRAPP58753 221 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
NPHP3-208ENST00000490993 PRO0255Q9UI72 69 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 ZNF22P17026 224 aaPredicted RBP5.37□□□□□ -1.55
NPHP3-208ENST00000490993 BEAN1Q3B7T3 259 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 Q6ZUT4 128 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 TRAV13-2A0A0B4J235 113 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 TRIOO75962 3097 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 SPTBN4Q9H254 2564 aa5.37□□□□□ -1.55
NPHP3-208ENST00000490993 REV3LO60673 3130 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 CSPG4Q6UVK1 2322 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 C10orf126Q8N4M7 172 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 MAPKAPK5-AS1Q8N8E1 139 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
NPHP3-208ENST00000490993 EDA2RQ9HAV5 297 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 ICOSQ9Y6W8 199 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 C2orf82Q6UX34 121 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 SIGMAR1Q99720 223 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 A4D1N5 150 aa5.36□□□□□ -1.55
NPHP3-208ENST00000490993 ZNF292O60281 2723 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 SPTBN5Q9NRC6 3674 aaKnown RBP5.35□□□□□ -1.55
NPHP3-208ENST00000490993 PROK1P58294 105 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 FHL3Q13643 280 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 KIR2DL5BQ8NHK3 375 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 C9JAW5 83 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 H3BMG7 143 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 TP73-AS1Q9UF72 201 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 CEMP1Q6PRD7 247 aaPredicted RBP5.35□□□□□ -1.55
NPHP3-208ENST00000490993 UBE2D4Q9Y2X8 147 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 TRAV8-4A0A0B4J246 113 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 A0A0J9YY99 117 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 PPDPFLQ8WWR9 84 aa5.35□□□□□ -1.55
NPHP3-208ENST00000490993 ANGP03950 147 aaKnown RBP5.34□□□□□ -1.55
NPHP3-208ENST00000490993 DOPEY1Q5JWR5 2465 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 A0A0B4J2C4 111 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 LINC00315P59091 139 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 DEFB135Q30KP9 77 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 GTSF1LQ9H1H1 148 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 C11orf68Q9H3H3 251 aaKnown RBP5.34□□□□□ -1.55
NPHP3-208ENST00000490993 ESM1Q9NQ30 184 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 C1orf158Q8N1D5 194 aa5.34□□□□□ -1.55
NPHP3-208ENST00000490993 MIFP14174 115 aa5.34□□□□□ -1.56
NPHP3-208ENST00000490993 MIAQ16674 131 aa5.34□□□□□ -1.56
NPHP3-208ENST00000490993 S100A7L2Q5SY68 101 aa5.34□□□□□ -1.56
NPHP3-208ENST00000490993 CHD8Q9HCK8 2581 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 SLC25A20O43772 301 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 TIMM17BO60830 172 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 UBE2D3P61077 147 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 UBE2D2P62837 147 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 RNASE8Q8TDE3 154 aaKnown RBP5.33□□□□□ -1.56
NPHP3-208ENST00000490993 PKD1L2Q7Z442 2459 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 IGLV4-69A0A075B6H9 119 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 A0A096LPF7 62 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 TRAV8-3A0A0A6YYJ7 113 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 CXCL5P42830 114 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 HIVEP2P31629 2446 aa5.33□□□□□ -1.56
NPHP3-208ENST00000490993 TRBV6-8A0A0A6YYG3 113 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 XCL1P47992 114 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 ETDBQ3ZM63 59 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 HIST2H2BDQ6DRA6 164 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 PFN2P35080 140 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 DOPEY2Q9Y3R5 2298 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 NDUFA1O15239 70 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 COX7A2LO14548 114 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 FAM222AQ5U5X8 452 aa5.32□□□□□ -1.56
NPHP3-208ENST00000490993 UBE2D1P51668 147 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 DEFB121Q5J5C9 76 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 LINC00482Q8N8I6 264 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 C11orf72Q8NBR9 251 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 AMELXQ99217 191 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 CHCHD7Q9BUK0 85 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms