RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 HIST1H1DP16402 221 aaKnown RBP-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 CCL18P55774 89 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 CFAP126Q5VTH2 177 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 AGPAT4-IT1Q9H0P7 198 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 MYOM3Q5VTT5 1437 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 FLNCQ14315 2725 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 NWD2Q9ULI1 1742 aa-0.24□□□□□ -2.45
SEMA3A-207ENST00000490883 PKDREJQ9NTG1 2253 aa-0.25□□□□□ -2.45
SEMA3A-207ENST00000490883 WNK3Q9BYP7 1800 aa-0.26□□□□□ -2.45
SEMA3A-207ENST00000490883 SELENOWP63302 87 aa-0.26□□□□□ -2.45
SEMA3A-207ENST00000490883 BIVM-ERCC5R4GMW8 1640 aa-0.27□□□□□ -2.45
SEMA3A-207ENST00000490883 TRAV13-2A0A0B4J235 113 aa-0.27□□□□□ -2.45
SEMA3A-207ENST00000490883 C10orf142B7Z368 130 aa-0.27□□□□□ -2.45
SEMA3A-207ENST00000490883 PPP1R17O96001 155 aa-0.27□□□□□ -2.45
SEMA3A-207ENST00000490883 KRTAP6-1Q3LI64 71 aa-0.27□□□□□ -2.45
SEMA3A-207ENST00000490883 PDCD10Q9BUL8 212 aa-0.27□□□□□ -2.45
SEMA3A-207ENST00000490883 PRO0255Q9UI72 69 aa-0.27□□□□□ -2.45
SEMA3A-207ENST00000490883 BICRAQ9NZM4 1560 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 PATJQ8NI35 1801 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 RBM3P98179 157 aaKnown RBP-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 Q8N8P6 123 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 COPS9Q8WXC6 57 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 LSM10Q969L4 123 aaKnown RBP-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 RERGLQ9H628 205 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 SCN3BQ9NY72 215 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 R4GMQ9 66 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 PRDM2Q13029 1718 aa-0.28□□□□□ -2.45
SEMA3A-207ENST00000490883 DOCK1Q14185 1865 aa-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 ZNF609O15014 1411 aa-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 TENM4Q6N022 2769 aa-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 NDUFA2O43678 99 aa-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 CFDP00746 253 aaPredicted RBP-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 SNRNP25Q9BV90 132 aaKnown RBP-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 LINC00470Q9BZP3 86 aa-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 CFTRP13569 1480 aa-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 KDM3BQ7LBC6 1761 aa-0.29□□□□□ -2.46
SEMA3A-207ENST00000490883 PKD1L1Q8TDX9 2849 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 KMT2AQ03164 3969 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 PIGBOS1A0A0B4J2F0 54 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 M0R135 149 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 C10orf128Q5T292 105 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 C12orf73Q69YU5 71 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 AQP10Q96PS8 301 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 SERP1Q9Y6X1 66 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 MRC1P22897 1456 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 PTPN13Q12923 2485 aa-0.3□□□□□ -2.46
SEMA3A-207ENST00000490883 NHSL1Q5SYE7 1610 aa-0.31□□□□□ -2.46
SEMA3A-207ENST00000490883 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.31□□□□□ -2.46
SEMA3A-207ENST00000490883 WFDC2Q14508 124 aa-0.31□□□□□ -2.46
SEMA3A-207ENST00000490883 CCDC58Q4VC31 144 aa-0.31□□□□□ -2.46
SEMA3A-207ENST00000490883 Q6AWC8 147 aa-0.31□□□□□ -2.46
SEMA3A-207ENST00000490883 NPVFQ9HCQ7 196 aa-0.31□□□□□ -2.46
SEMA3A-207ENST00000490883 M0R3E3 92 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 S100A12P80511 92 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 MEIG1Q5JSS6 88 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 SMIM4Q8WVI0 70 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 ARL11Q969Q4 196 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 LENEPQ9Y5L5 61 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 VWFP04275 2813 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 USF3Q68DE3 2245 aa-0.32□□□□□ -2.46
SEMA3A-207ENST00000490883 ARAP2Q8WZ64 1704 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 CHD6Q8TD26 2715 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 GNG7O60262 68 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 SPAG11BQ08648 103 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 SPAG11AQ6PDA7 123 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 TTC9CQ8N5M4 171 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 MYH7P12883 1935 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 MUC12Q9UKN1 5478 aa-0.33□□□□□ -2.46
SEMA3A-207ENST00000490883 DOCK2Q92608 1830 aa-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 LAMC1P11047 1609 aa-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 SPTBN1Q01082 2364 aaKnown RBP-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 BCE1O60756 84 aa-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 BTG2P78543 158 aa-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 PPIP5K1Q6PFW1 1433 aa-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 NAA60Q9H7X0 242 aa-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 FOCADQ5VW36 1801 aa-0.34□□□□□ -2.46
SEMA3A-207ENST00000490883 MYCBP2O75592 4640 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 ZNF236Q9UL36 1845 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 TRAV22A0A0B4J277 110 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 Q5VSD8 79 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 AMELXQ99217 191 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 SPCS1Q9Y6A9 102 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 DSTQ03001 7570 aaKnown RBP-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 STAB1Q9NY15 2570 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 MYO7BQ6PIF6 2116 aa-0.35□□□□□ -2.47
SEMA3A-207ENST00000490883 CTXND1A0A1B0GTU2 59 aa-0.36□□□□□ -2.47
SEMA3A-207ENST00000490883 FAM25AB3EWG3 89 aa-0.36□□□□□ -2.47
SEMA3A-207ENST00000490883 FAM25CB3EWG5 89 aa-0.36□□□□□ -2.47
SEMA3A-207ENST00000490883 FAM25GB3EWG6 89 aa-0.36□□□□□ -2.47
SEMA3A-207ENST00000490883 K7EP13 123 aa-0.36□□□□□ -2.47
SEMA3A-207ENST00000490883 Q8IZM0 81 aa-0.36□□□□□ -2.47
SEMA3A-207ENST00000490883 TNXBP22105 4242 aa-0.36□□□□□ -2.47
SEMA3A-207ENST00000490883 LRP6O75581 1613 aa-0.37□□□□□ -2.47
SEMA3A-207ENST00000490883 LRRC37A2A6NM11 1700 aa-0.37□□□□□ -2.47
SEMA3A-207ENST00000490883 PHLPP1O60346 1717 aa-0.37□□□□□ -2.47
SEMA3A-207ENST00000490883 DEFB109BQ30KR1 87 aa-0.37□□□□□ -2.47
SEMA3A-207ENST00000490883 Q56UQ5 140 aa-0.37□□□□□ -2.47
SEMA3A-207ENST00000490883 LINC00472Q9H8W2 130 aa-0.37□□□□□ -2.47
SEMA3A-207ENST00000490883 HMGN1P05114 100 aa-0.38□□□□□ -2.47
SEMA3A-207ENST00000490883 HAMPP81172 84 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms