RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	COX6C	P09669	75 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	CD28	P10747	220 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	HILS1	P60008	231 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	HERVK_113	P63121	156 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	RRN3P1	Q2M238	152 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	CD300E	Q496F6	205 aa	Predicted RBP	4.64	□□□□□ -1.67
FN1-223	ENST00000490833	CFAP126	Q5VTH2	177 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	TMEM101	Q96IK0	257 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	GEMIN7	Q9H840	131 aa	Known RBP	4.64	□□□□□ -1.67
FN1-223	ENST00000490833	MRPL16	Q9NX20	251 aa	Known RBP	4.64	□□□□□ -1.67
FN1-223	ENST00000490833	IGSF10	Q6WRI0	2623 aa		4.64	□□□□□ -1.67
FN1-223	ENST00000490833	TRBV6-4	A0A1B0GX49	114 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	TMEM223	A0PJW6	202 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	KNCN	A6PVL3	124 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833		M0QXV9	152 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	PRB1	P04280	392 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	PRB4	P10163	310 aa	Predicted RBP	4.63	□□□□□ -1.67
FN1-223	ENST00000490833	AZU1	P20160	251 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	FXYD2	P54710	66 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	GAGE13	Q4V321	117 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833		Q6ZQT7	251 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	FAM19A3	Q7Z5A8	133 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	NDUFA11	Q86Y39	141 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	ATP6V0E2	Q8NHE4	81 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	RAB37	Q96AX2	223 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	VPS25	Q9BRG1	176 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	PRO1854	Q9UHT4	67 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	SPG11	Q96JI7	2443 aa		4.63	□□□□□ -1.67
FN1-223	ENST00000490833	TACC2	O95359	2948 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	ABCA2	Q9BZC7	2435 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	IGLV4-69	A0A075B6H9	119 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	IGLV4-3	A0A075B6K6	122 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833		A0A0B4J2C4	111 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	IGHV1-58	A0A0C4DH39	117 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833		A0A0J9YY99	117 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	SAP30	O75446	220 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	HTN1	P15515	57 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	UBE2D1	P51668	147 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	HERV-K104	P63124	156 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	C10orf99	Q6UWK7	81 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	MAPKAPK5-AS1	Q8N8E1	139 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	C11orf72	Q8NBR9	251 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	MAPK1IP1L	Q8NDC0	245 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	LINC01006	Q8NI28	216 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.62	□□□□□ -1.67
FN1-223	ENST00000490833	OVOL2	Q9BRP0	275 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	JPT2	Q9H910	190 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	C19orf73	Q9NVV2	129 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833	CSPG4	Q6UVK1	2322 aa		4.62	□□□□□ -1.67
FN1-223	ENST00000490833		G3V4G9	280 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833	IGLV1-51	P01701	117 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833		P0DMU3	169 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833	FAM231A	P0DMU4	169 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833	FAM231C	P0DMU5	169 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833	DEFB1	P60022	68 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833	RPL39	P62891	51 aa	Known RBP	4.61	□□□□□ -1.67
FN1-223	ENST00000490833	C10orf126	Q8N4M7	172 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833	TENM4	Q6N022	2769 aa		4.61	□□□□□ -1.67
FN1-223	ENST00000490833	MYO18B	Q8IUG5	2567 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	TRAV26-1	A0A087WT03	109 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	TRGV1	A0A0A0MS02	117 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	TMEM262	E9PQX1	116 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833		H3BMG7	143 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833		K7EQD1	137 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	UBE2L6	O14933	153 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	IGHV3-30	P01768	117 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	PF4	P02776	101 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	SCGB1C2	P0DMR2	95 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	IGHV3-30-5	P0DP03	117 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	ZNF22	P17026	224 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-223	ENST00000490833	KRTAP10-9	P60411	292 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	SH2D6	Q7Z4S9	175 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	WFDC11	Q8NEX6	87 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	ZNRF2	Q8NHG8	242 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	RNASE8	Q8TDE3	154 aa	Known RBP	4.6	□□□□□ -1.67
FN1-223	ENST00000490833	SPANXD	Q9BXN6	97 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	SPANXC	Q9NY87	97 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	ERG28	Q9UKR5	140 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	UBE2D4	Q9Y2X8	147 aa		4.6	□□□□□ -1.67
FN1-223	ENST00000490833	TRGV2	A0A075B6R0	118 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	IGLV5-45	A0A087WSX0	123 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	ANKRD17	O75179	2603 aa	Known RBP	4.59	□□□□□ -1.67
FN1-223	ENST00000490833	IGHV3-30-3	P0DP02	117 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	SCGB1A1	P11684	91 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	PLA2G2A	P14555	144 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	DEFB136	Q30KP8	78 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	ODF3L2	Q3SX64	289 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	MTURN	Q8N3F0	131 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	KIR2DL5B	Q8NHK3	375 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	IL17D	Q8TAD2	202 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	CREBBP	Q92793	2442 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	VSIG2	Q96IQ7	327 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	CITED2	Q99967	270 aa	Predicted RBP	4.59	□□□□□ -1.67
FN1-223	ENST00000490833	XCL2	Q9UBD3	114 aa		4.59	□□□□□ -1.67
FN1-223	ENST00000490833	MUC4	Q99102	2169 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	USP9X	Q93008	2570 aa	Predicted RBP	4.58	□□□□□ -1.68
FN1-223	ENST00000490833	LOC107984156	A0A0G2JMH3	177 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	TRBV30	A0A0K0K1B3	111 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	TEX48	A0A1B0GUV7	120 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	CFC1B	P0CG36	223 aa		4.58	□□□□□ -1.68

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