RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 FAT3Q8TDW7 4589 aa4.75□□□□□ -1.65
PRPF4B-208ENST00000490653 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
PRPF4B-208ENST00000490653 ANGP03950 147 aaKnown RBP4.75□□□□□ -1.65
PRPF4B-208ENST00000490653 NKX2-5P52952 324 aaPredicted RBP4.75□□□□□ -1.65
PRPF4B-208ENST00000490653 RBX1P62877 108 aa4.75□□□□□ -1.65
PRPF4B-208ENST00000490653 Q6ZSA8 131 aa4.75□□□□□ -1.65
PRPF4B-208ENST00000490653 VAX2Q9UIW0 290 aa4.75□□□□□ -1.65
PRPF4B-208ENST00000490653 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 IFNA1P01562 189 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 P01737 135 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 PRSS1P07477 247 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 SMIM17P0DL12 118 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 RPS20P60866 119 aaKnown RBP4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 CACNG7P62955 275 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 ELOBQ15370 118 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 EIF5AL1Q6IS14 154 aaKnown RBP4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 ALKAL2Q6UX46 152 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 LINC00269Q8N2A0 174 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 C20orf203Q8NBC4 194 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 GTSF1Q8WW33 167 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 RMI2Q96E14 147 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 AP1S3Q96PC3 154 aa4.74□□□□□ -1.65
PRPF4B-208ENST00000490653 IGLV10-54A0A075B6I4 117 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 TRAV26-2A0A0B4J265 109 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 USP17L23D6RBM5 183 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 TEX46H3BTG2 121 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 PANO1I0J062 215 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 PDE6DO43924 150 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 Q0VG73 95 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 KCNIP4Q6PIL6 250 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 RASL11AQ6T310 242 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 SCXQ7RTU7 201 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 GATD1Q8NB37 220 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 CIRBP-AS1Q8TBR5 109 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 RPL39LQ96EH5 51 aaKnown RBP4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 CHCHD7Q9BUK0 85 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 C1orf43Q9BWL3 253 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 COX11Q9Y6N1 276 aa4.73□□□□□ -1.65
PRPF4B-208ENST00000490653 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 IGHV1-24A0A0C4DH33 117 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 F2Z2F3 143 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 HLA-DQA1P01909 254 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 TWIST1Q15672 202 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 IQCJQ1A5X6 159 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 AKAP14Q86UN6 197 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 DPH3P1Q9H4G8 78 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 RPP21Q9H633 154 aaKnown RBP4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 NIT2Q9NQR4 276 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 PRR34Q9NV39 138 aa4.72□□□□□ -1.65
PRPF4B-208ENST00000490653 TRBV25-1A0A075B6N4 114 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 GATCO43716 136 aaKnown RBP4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 CRPP02741 224 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 CEBPGP53567 150 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 WDR73Q6P4I2 378 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 LYPD6BQ8NI32 183 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 SMIM12Q96EX1 92 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 PGLYRP4Q96LB8 373 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 CHAC1Q9BUX1 264 aa4.71□□□□□ -1.66
PRPF4B-208ENST00000490653 XKRY2A2RUG3 117 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 KRTAP29-1A8MX34 341 aaPredicted RBP4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 ZNF561-AS1K7EIQ3 104 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 TRGC1P0CF51 173 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 CTRLP40313 264 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 BLOC1S1P78537 153 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 REG3AQ06141 175 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 MIAQ16674 131 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 TMEM97Q5BJF2 176 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 CNFNQ9BYD5 112 aa4.7□□□□□ -1.66
PRPF4B-208ENST00000490653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 IGKV3OR2-268A0A0C4DH90 116 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 IGKV2-29A2NJV5 120 aaPredicted RBP4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 FAM231BA6NCW3 169 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 C9JQL5 133 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 H7C1H1 209 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 SRP19P09132 144 aaKnown RBP4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 HNRNPA3P51991 378 aaKnown RBP4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 SDIM1Q6ZPB5 146 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 C9orf163Q8N9P6 203 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 RNF185Q96GF1 192 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 BIN3Q9NQY0 253 aa4.69□□□□□ -1.66
PRPF4B-208ENST00000490653 A0A1B0GUV1 79 aa4.68□□□□□ -1.66
PRPF4B-208ENST00000490653 GAGE12HA6NDE8 117 aa4.68□□□□□ -1.66
PRPF4B-208ENST00000490653 TMEM250H0YL14 139 aa4.68□□□□□ -1.66
PRPF4B-208ENST00000490653 AMTP48728 403 aa4.68□□□□□ -1.66
PRPF4B-208ENST00000490653 COTL1Q14019 142 aa4.68□□□□□ -1.66
PRPF4B-208ENST00000490653 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
PRPF4B-208ENST00000490653 EIF5A2Q9GZV4 153 aaKnown RBP4.68□□□□□ -1.66
PRPF4B-208ENST00000490653 A8MWL6 223 aa4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 SMKR1H3BMG3 65 aa4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 CHTF8P0CG12 524 aa4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 TAGLN2P37802 199 aaKnown RBP4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 RPS10P46783 165 aaKnown RBP4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 PKIAP61925 76 aa4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 C14orf177Q52M58 125 aa4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 DGAT2L7PQ6IED9 249 aa4.67□□□□□ -1.66
PRPF4B-208ENST00000490653 LINC01551Q86U37 167 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms