RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 TNXBP22105 4242 aa10.1□□□□□ -0.79
ERGIC3-217ENST00000488935 GAGE12HA6NDE8 117 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 TEX46H3BTG2 121 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 H7C1H1 209 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 IFNA1P01562 189 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 P01737 135 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 GNG4P50150 75 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 FOXA3P55318 350 aaPredicted RBP10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 RPS20P60866 119 aaKnown RBP10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 CNBPP62633 177 aaKnown RBP10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 HIGD2BQ4VC39 106 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 CLRN3Q8NCR9 226 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 NIT2Q9NQR4 276 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 MED9Q9NWA0 146 aa10.09□□□□□ -0.79
ERGIC3-217ENST00000488935 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 TRAV1-1A0A0B4J248 108 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 UBE2L6O14933 153 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 AMTP48728 403 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 BLOC1S1P78537 153 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 NUDT10Q8NFP7 164 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 AP5S1Q9NUS5 200 aa10.08□□□□□ -0.8
ERGIC3-217ENST00000488935 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 A0A1B0GUV1 79 aa10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 CIRBPQ14011 172 aaKnown RBP10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 TWIST1Q15672 202 aa10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 C15orf56Q8N910 161 aa10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 GATD1Q8NB37 220 aa10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 RPL39LQ96EH5 51 aaKnown RBP10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 RNASE7Q9H1E1 156 aaKnown RBP10.07□□□□□ -0.8
ERGIC3-217ENST00000488935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.06□□□□□ -0.8
ERGIC3-217ENST00000488935 IGKV2-29A2NJV5 120 aaPredicted RBP10.06□□□□□ -0.8
ERGIC3-217ENST00000488935 PHOX2AO14813 284 aa10.06□□□□□ -0.8
ERGIC3-217ENST00000488935 TRGC1P0CF51 173 aa10.06□□□□□ -0.8
ERGIC3-217ENST00000488935 COX6A2Q02221 97 aa10.06□□□□□ -0.8
ERGIC3-217ENST00000488935 COTL1Q14019 142 aa10.06□□□□□ -0.8
ERGIC3-217ENST00000488935 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
ERGIC3-217ENST00000488935 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
ERGIC3-217ENST00000488935 F2Z2F3 143 aa10.05□□□□□ -0.8
ERGIC3-217ENST00000488935 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
ERGIC3-217ENST00000488935 SPACA4Q8TDM5 124 aa10.05□□□□□ -0.8
ERGIC3-217ENST00000488935 K7EN84 100 aa10.04□□□□□ -0.8
ERGIC3-217ENST00000488935 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
ERGIC3-217ENST00000488935 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
ERGIC3-217ENST00000488935 PGLYRP4Q96LB8 373 aa10.04□□□□□ -0.8
ERGIC3-217ENST00000488935 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
ERGIC3-217ENST00000488935 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
ERGIC3-217ENST00000488935 MAJINQ3KP22 176 aa10.03□□□□□ -0.8
ERGIC3-217ENST00000488935 WDR73Q6P4I2 378 aa10.03□□□□□ -0.8
ERGIC3-217ENST00000488935 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
ERGIC3-217ENST00000488935 OCC1Q8TAD7 63 aa10.03□□□□□ -0.8
ERGIC3-217ENST00000488935 GAS8-AS1O95177 125 aa10.02□□□□□ -0.81
ERGIC3-217ENST00000488935 BCL2P10415 239 aa10.02□□□□□ -0.81
ERGIC3-217ENST00000488935 CTRLP40313 264 aa10.02□□□□□ -0.81
ERGIC3-217ENST00000488935 Q6ZRU5 148 aa10.02□□□□□ -0.81
ERGIC3-217ENST00000488935 GTSF1Q8WW33 167 aa10.02□□□□□ -0.81
ERGIC3-217ENST00000488935 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
ERGIC3-217ENST00000488935 PDE6DO43924 150 aa10.01□□□□□ -0.81
ERGIC3-217ENST00000488935 AMMECR1LQ6DCA0 310 aa10.01□□□□□ -0.81
ERGIC3-217ENST00000488935 RPP21Q9H633 154 aaKnown RBP10.01□□□□□ -0.81
ERGIC3-217ENST00000488935 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
ERGIC3-217ENST00000488935 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
ERGIC3-217ENST00000488935 RPS10P46783 165 aaKnown RBP10□□□□□ -0.81
ERGIC3-217ENST00000488935 IFITM2Q01629 132 aa10□□□□□ -0.81
ERGIC3-217ENST00000488935 FGF6P10767 208 aa9.99□□□□□ -0.81
ERGIC3-217ENST00000488935 STPG4Q8N801 248 aa9.99□□□□□ -0.81
ERGIC3-217ENST00000488935 SMIM12Q96EX1 92 aa9.99□□□□□ -0.81
ERGIC3-217ENST00000488935 A0A096LNI7 61 aa9.98□□□□□ -0.81
ERGIC3-217ENST00000488935 XCL1P47992 114 aa9.98□□□□□ -0.81
ERGIC3-217ENST00000488935 RAB14P61106 215 aa9.98□□□□□ -0.81
ERGIC3-217ENST00000488935 RNF185Q96GF1 192 aa9.98□□□□□ -0.81
ERGIC3-217ENST00000488935 LRP2P98164 4655 aa9.98□□□□□ -0.81
ERGIC3-217ENST00000488935 FAM231BA6NCW3 169 aa9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 NDUFS6O75380 124 aaKnown RBP9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 APCSP02743 223 aa9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 FOXI1Q12951 378 aa9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 CNFNQ9BYD5 112 aa9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 BIN3Q9NQY0 253 aa9.97□□□□□ -0.81
ERGIC3-217ENST00000488935 CEBPGP53567 150 aa9.96□□□□□ -0.82
ERGIC3-217ENST00000488935 C7orf33Q8WU49 177 aa9.96□□□□□ -0.82
ERGIC3-217ENST00000488935 GATCO43716 136 aaKnown RBP9.95□□□□□ -0.82
ERGIC3-217ENST00000488935 PMCHP20382 165 aa9.95□□□□□ -0.82
ERGIC3-217ENST00000488935 CLLU1Q5K131 121 aa9.95□□□□□ -0.82
ERGIC3-217ENST00000488935 FAM210AQ96ND0 272 aa9.95□□□□□ -0.82
ERGIC3-217ENST00000488935 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
ERGIC3-217ENST00000488935 GVQW2A0A096LPI5 108 aaPredicted RBP9.94□□□□□ -0.82
ERGIC3-217ENST00000488935 CCL25O15444 150 aa9.94□□□□□ -0.82
ERGIC3-217ENST00000488935 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
ERGIC3-217ENST00000488935 TSHBP01222 138 aa9.93□□□□□ -0.82
ERGIC3-217ENST00000488935 SMIM15Q7Z3B0 74 aa9.93□□□□□ -0.82
ERGIC3-217ENST00000488935 EIF5A2Q9GZV4 153 aaKnown RBP9.93□□□□□ -0.82
ERGIC3-217ENST00000488935 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
ERGIC3-217ENST00000488935 I3L3M4 83 aa9.92□□□□□ -0.82
ERGIC3-217ENST00000488935 NCR2O95944 276 aa9.92□□□□□ -0.82
ERGIC3-217ENST00000488935 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
ERGIC3-217ENST00000488935 RNF213Q63HN8 5207 aa9.91□□□□□ -0.82
ERGIC3-217ENST00000488935 TMEM250H0YL14 139 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms