RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 A0A1B0GW54 56 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 C19orf71A6NCJ1 209 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 CPSF4LA6NMK7 179 aaKnown RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 A8MWP4 228 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 CCL22O00626 93 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 CCL16O15467 120 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 SLC25A20O43772 301 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 ZNF73O43830 326 aaPredicted RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 IGKV1D-33P01593 117 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 IGKV1-33P01594 117 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 IGKV1-5P01602 117 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 PRM2P04554 102 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 IFI6P09912 130 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 CXCL8P10145 99 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 MGST1P10620 155 aaKnown RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 UBE2D1P51668 147 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 NPC2P61916 151 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 UBE2L3P68036 154 aaKnown RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 ZNF56Q15929 161 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 MRPL51Q4U2R6 128 aaKnown RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 LINC01590Q5TEZ4 76 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 GDF5OSQ5U4N7 250 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 FP248Q71RG6 208 aaPredicted RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 KTN1-AS1Q86SY8 53 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 RPRMLQ8N4K4 120 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 C10orf105Q8TEF2 133 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 IFI27L1Q96BM0 104 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 GPX7Q96SL4 187 aaPredicted RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 DSCR8Q96T75 97 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 TRGV9Q99603 122 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 LINC00574Q9H8X3 128 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 NXT2Q9NPJ8 142 aaKnown RBP1.87□□□□□ -2.11
SSR1-209ENST00000488834 EPDR1Q9UM22 224 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 SHANK1Q9Y566 2161 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 COL18A1P39060 1754 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 IGHV1-58A0A0C4DH39 117 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 SYNGR2O43760 224 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 SH2D1AO60880 128 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 LINC00305Q7Z4B0 112 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 NDUFA11Q86Y39 141 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 WFDC11Q8NEX6 87 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 DCANP1Q8TF63 244 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 BRK1Q8WUW1 75 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 TAS2R4Q9NYW5 299 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 LINC00588Q9Y4M8 146 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 LHFPL6Q9Y693 200 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 U3KQK5 164 aa1.86□□□□□ -2.11
SSR1-209ENST00000488834 INTS1Q8N201 2190 aaKnown RBP1.85□□□□□ -2.11
SSR1-209ENST00000488834 A0A0B4J2C4 111 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 TRBV10-2A0A0K0K1G8 114 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 LINC01549A6NIU2 74 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 H3BMM0 161 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 BUB1B-PAK6H3BSN5 160 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 LECT2O14960 151 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 SPINK4O60575 86 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 BCE1O60756 84 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 IGLV6-57P01721 117 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 TCRAP04437 139 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 P0C880 135 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 IGHV3-30-3P0DP02 117 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 SLC25A16P16260 332 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 RPL27AP46776 148 aaKnown RBP1.85□□□□□ -2.11
SSR1-209ENST00000488834 RPL18Q07020 188 aaKnown RBP1.85□□□□□ -2.11
SSR1-209ENST00000488834 TMEM155Q4W5P6 130 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 UBE2WQ96B02 151 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 ARHGAP5-AS1Q96IT6 56 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 TTTY10Q9BZA0 68 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 CYSTM1Q9H1C7 97 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 PSENENQ9NZ42 101 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 ICOSQ9Y6W8 199 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 MED12Q93074 2177 aa1.85□□□□□ -2.11
SSR1-209ENST00000488834 ARHGAP32A7KAX9 2087 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 CACNA1DQ01668 2161 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 TMSB15BA0A087X1C1 80 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 IGKV2D-26A0A0A0MRZ7 120 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 LOC107984156A0A0G2JMH3 177 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 UBE2L5PA0A1B0GUS4 154 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 LINC01546A6NGU7 62 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 H3BVH4 76 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 M0R378 163 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 LEPROTO15243 131 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 HBDP02042 147 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 CCL3P10147 92 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 S100A4P26447 101 aaKnown RBP1.84□□□□□ -2.11
SSR1-209ENST00000488834 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
SSR1-209ENST00000488834 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 PCBD1P61457 104 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 HBBP68871 147 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 ATXN8Q156A1 80 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 ARL17AQ8IVW1 177 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 PFN4Q8NHR9 129 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 TTTY13Q9BZ97 58 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 R4GMQ9 66 aa1.84□□□□□ -2.11
SSR1-209ENST00000488834 SPAG17Q6Q759 2223 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 TEX49A0A1B0GTD5 131 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 A0A1B0GWA3 101 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 IBA57-AS1B1ANH7 110 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 NDUFB3O43676 98 aa1.83□□□□□ -2.12
SSR1-209ENST00000488834 LY6HO94772 140 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms