RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TMEM241Q24JQ0 296 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 RASL11AQ6T310 242 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 Q8N976 141 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 GATD1Q8NB37 220 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 CLRN3Q8NCR9 226 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 TSKUQ8WUA8 353 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 ISOC2Q96AB3 205 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 RPL39LQ96EH5 51 aaKnown RBP4.75□□□□□ -1.65
UBE4B-209ENST00000487244 CHCHD5Q9BSY4 110 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 OSTCQ9NRP0 149 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 URGCP-MRPS24S4R325 110 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 V9GYV3 84 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 H7C1H1 209 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 KRTAP10-1P60331 282 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 GAGE6Q13070 117 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 PEA15Q15121 130 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 CLPSL2Q6UWE3 100 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 ENHOQ6UWT2 76 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 C15orf54Q8N8G6 183 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 UBE2WQ96B02 151 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 NIT2Q9NQR4 276 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 NAT8Q9UHE5 227 aa4.74□□□□□ -1.65
UBE4B-209ENST00000487244 TRBV25-1A0A075B6N4 114 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 TRAV8-3A0A0A6YYJ7 113 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 A0A1B0GUT8 65 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
UBE4B-209ENST00000487244 RBX1P62877 108 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 IQCJQ1A5X6 159 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 FAM74A3Q4VXF1 159 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 ATRAIDQ6UW56 229 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 Q8N814 137 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 NUP35Q8NFH5 326 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 BAALCQ8WXS3 180 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 RNF185Q96GF1 192 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 CHCHD7Q9BUK0 85 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 GFRA4Q9GZZ7 299 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 DNAH5Q8TE73 4624 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 HSPG2P98160 4391 aa4.73□□□□□ -1.65
UBE4B-209ENST00000487244 IGKV2D-24A0A075B6R9 120 aa4.72□□□□□ -1.65
UBE4B-209ENST00000487244 IGHV1-24A0A0C4DH33 117 aa4.72□□□□□ -1.65
UBE4B-209ENST00000487244 RPS10P46783 165 aaKnown RBP4.72□□□□□ -1.65
UBE4B-209ENST00000487244 HAMPP81172 84 aa4.72□□□□□ -1.65
UBE4B-209ENST00000487244 IFITM2Q01629 132 aa4.72□□□□□ -1.65
UBE4B-209ENST00000487244 AMN1Q8IY45 258 aa4.72□□□□□ -1.65
UBE4B-209ENST00000487244 TM2D2Q9BX73 214 aa4.72□□□□□ -1.65
UBE4B-209ENST00000487244 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
UBE4B-209ENST00000487244 IGLV4-60A0A075B6I1 120 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.71□□□□□ -1.66
UBE4B-209ENST00000487244 IGLV5-52A0A0A0MRZ9 124 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 FAM231BA6NCW3 169 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 SMKR1H3BMG3 65 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 NCR2O95944 276 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 AMTP48728 403 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 COTL1Q14019 142 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 TMEM97Q5BJF2 176 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 KCNIP4Q6PIL6 250 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 SMIM15Q7Z3B0 74 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 LINC00269Q8N2A0 174 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.71□□□□□ -1.66
UBE4B-209ENST00000487244 C20orf203Q8NBC4 194 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 BORCS7Q96B45 105 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 TMEM243Q9BU79 118 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 TMEM191AQ9H0A3 160 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 SMDT1Q9H4I9 107 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 PRR34Q9NV39 138 aa4.71□□□□□ -1.66
UBE4B-209ENST00000487244 APOBP04114 4563 aaKnown RBP4.71□□□□□ -1.66
UBE4B-209ENST00000487244 SDHAF1A6NFY7 115 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 CRPP02741 224 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 RAB4AP20338 218 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 GCSHP23434 173 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 XGP55808 180 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 ELOBQ15370 118 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 KRTAP26-1Q6PEX3 210 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 FRZBQ92765 325 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 RMI2Q96E14 147 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 NAT8BQ9UHF3 227 aa4.7□□□□□ -1.66
UBE4B-209ENST00000487244 IGLV10-54A0A075B6I4 117 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.69□□□□□ -1.66
UBE4B-209ENST00000487244 TRBV6-5A0A0K0K1A5 114 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 IGKV2-29A2NJV5 120 aaPredicted RBP4.69□□□□□ -1.66
UBE4B-209ENST00000487244 B5MCH6 92 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 TSHBP01222 138 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 HLA-DQA1P01909 254 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 CAMPP49913 170 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 RAB14P61106 215 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 PKIAP61925 76 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 Q0VG73 95 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 RIGQ13278 110 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 CLLU1Q5K131 121 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 MRPL54Q6P161 138 aaKnown RBP4.69□□□□□ -1.66
UBE4B-209ENST00000487244 NTN5Q8WTR8 489 aaPredicted RBP4.69□□□□□ -1.66
UBE4B-209ENST00000487244 MRAP2Q96G30 205 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 TMEM70Q9BUB7 260 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 C1orf43Q9BWL3 253 aa4.69□□□□□ -1.66
UBE4B-209ENST00000487244 TMEM242Q9NWH2 141 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms