RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 TRBV6-5A0A0K0K1A5 114 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 C1orf196B1AJZ1 125 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 UBE2D3P61077 147 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 UBE2D2P62837 147 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 MRPL23Q16540 153 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
SEMA4D-219ENST00000486935 C18orf32Q8TCD1 76 aa10.59□□□□□ -0.71
SEMA4D-219ENST00000486935 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
SEMA4D-219ENST00000486935 MRPS16Q9Y3D3 137 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-219ENST00000486935 PCLOQ9Y6V0 5065 aa10.58□□□□□ -0.72
SEMA4D-219ENST00000486935 PMCHP20382 165 aa10.58□□□□□ -0.72
SEMA4D-219ENST00000486935 TTC32Q5I0X7 151 aa10.58□□□□□ -0.72
SEMA4D-219ENST00000486935 ATP6V0E2Q8NHE4 81 aa10.58□□□□□ -0.72
SEMA4D-219ENST00000486935 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
SEMA4D-219ENST00000486935 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.72
SEMA4D-219ENST00000486935 C16orf90A8MZG2 172 aa10.57□□□□□ -0.72
SEMA4D-219ENST00000486935 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-219ENST00000486935 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-219ENST00000486935 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
SEMA4D-219ENST00000486935 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-219ENST00000486935 I3L3M4 83 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 VCYO14598 125 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 IFI27P40305 119 aaPredicted RBP10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 Q8N8P6 123 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 PRSS3P2Q8NHM4 247 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
SEMA4D-219ENST00000486935 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
SEMA4D-219ENST00000486935 PRSS47A8MTI9 375 aa10.55□□□□□ -0.72
SEMA4D-219ENST00000486935 RAB5BP61020 215 aa10.55□□□□□ -0.72
SEMA4D-219ENST00000486935 RPL32P62910 135 aaKnown RBP10.55□□□□□ -0.72
SEMA4D-219ENST00000486935 BAGE3Q86Y29 109 aa10.55□□□□□ -0.72
SEMA4D-219ENST00000486935 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
SEMA4D-219ENST00000486935 TCAPO15273 167 aa10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 TSHBP01222 138 aa10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 FCER1GP30273 86 aa10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 COTL1Q14019 142 aa10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 RNASEKQ6P5S7 137 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 FA2HQ7L5A8 372 aa10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 KIR2DL4Q99706 377 aa10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
SEMA4D-219ENST00000486935 Q0VG73 95 aa10.53□□□□□ -0.72
SEMA4D-219ENST00000486935 SIVA1O15304 175 aa10.52□□□□□ -0.73
SEMA4D-219ENST00000486935 LYPD5Q6UWN5 251 aa10.52□□□□□ -0.73
SEMA4D-219ENST00000486935 SPATA12Q7Z6I5 190 aa10.52□□□□□ -0.73
SEMA4D-219ENST00000486935 NIT1Q86X76 327 aa10.52□□□□□ -0.73
SEMA4D-219ENST00000486935 RYR1P21817 5038 aa10.52□□□□□ -0.73
SEMA4D-219ENST00000486935 AMTP48728 403 aa10.51□□□□□ -0.73
SEMA4D-219ENST00000486935 NDUFA6P56556 154 aa10.51□□□□□ -0.73
SEMA4D-219ENST00000486935 TMEM97Q5BJF2 176 aa10.51□□□□□ -0.73
SEMA4D-219ENST00000486935 NTM-AS1Q6ZSK4 140 aa10.51□□□□□ -0.73
SEMA4D-219ENST00000486935 URB1-AS1Q96HZ7 61 aa10.51□□□□□ -0.73
SEMA4D-219ENST00000486935 IGHV1-24A0A0C4DH33 117 aa10.5□□□□□ -0.73
SEMA4D-219ENST00000486935 LINC00614P0C842 121 aa10.5□□□□□ -0.73
SEMA4D-219ENST00000486935 TRBV25-1A0A075B6N4 114 aa10.49□□□□□ -0.73
SEMA4D-219ENST00000486935 TRBV6-8A0A0A6YYG3 113 aa10.49□□□□□ -0.73
SEMA4D-219ENST00000486935 SERF1AO75920 110 aa10.49□□□□□ -0.73
SEMA4D-219ENST00000486935 BTF3P20290 206 aaKnown RBP10.49□□□□□ -0.73
SEMA4D-219ENST00000486935 LAGE3Q14657 143 aa10.49□□□□□ -0.73
SEMA4D-219ENST00000486935 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
SEMA4D-219ENST00000486935 TMA7Q9Y2S6 64 aaKnown RBP10.49□□□□□ -0.73
SEMA4D-219ENST00000486935 TIRAPP58753 221 aa10.48□□□□□ -0.73
SEMA4D-219ENST00000486935 ORMDL2Q53FV1 153 aa10.48□□□□□ -0.73
SEMA4D-219ENST00000486935 LELP1Q5T871 98 aa10.48□□□□□ -0.73
SEMA4D-219ENST00000486935 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
SEMA4D-219ENST00000486935 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
SEMA4D-219ENST00000486935 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
SEMA4D-219ENST00000486935 LRP1BQ9NZR2 4599 aa10.48□□□□□ -0.73
SEMA4D-219ENST00000486935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 K7EMI3 77 aa10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 HSBP1O75506 76 aa10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 LINC00310P59036 64 aa10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 PMCHL1Q16048 86 aa10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 CHCHD5Q9BSY4 110 aa10.47□□□□□ -0.73
SEMA4D-219ENST00000486935 HSPG2P98160 4391 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 TRAV8-6A0A0B4J262 113 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 UBE2L6O14933 153 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 NUPR1O60356 82 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 CDK2AP2O75956 126 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 KRTAP10-2P60368 255 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 GAGE6Q13070 117 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.73
SEMA4D-219ENST00000486935 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
SEMA4D-219ENST00000486935 S100A6P06703 90 aa10.45□□□□□ -0.74
SEMA4D-219ENST00000486935 ESDP10768 282 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms