RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 IQCJQ1A5X6 159 aa8.78□□□□□ -1
HDAC6-229ENST00000486665 MAP1LC3AQ9H492 121 aa8.78□□□□□ -1
HDAC6-229ENST00000486665 LINC00588Q9Y4M8 146 aa8.78□□□□□ -1
HDAC6-229ENST00000486665 FAT2Q9NYQ8 4349 aa8.77□□□□□ -1.01
HDAC6-229ENST00000486665 TSHBP01222 138 aa8.77□□□□□ -1.01
HDAC6-229ENST00000486665 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-229ENST00000486665 TIRAPP58753 221 aa8.77□□□□□ -1.01
HDAC6-229ENST00000486665 SMIM2Q9BVW6 85 aa8.77□□□□□ -1.01
HDAC6-229ENST00000486665 TCAPO15273 167 aa8.76□□□□□ -1.01
HDAC6-229ENST00000486665 Q8N8P6 123 aa8.76□□□□□ -1.01
HDAC6-229ENST00000486665 C18orf32Q8TCD1 76 aa8.76□□□□□ -1.01
HDAC6-229ENST00000486665 DNAH2Q9P225 4427 aa8.76□□□□□ -1.01
HDAC6-229ENST00000486665 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
HDAC6-229ENST00000486665 CCL18P55774 89 aa8.75□□□□□ -1.01
HDAC6-229ENST00000486665 COTL1Q14019 142 aa8.75□□□□□ -1.01
HDAC6-229ENST00000486665 LELP1Q5T871 98 aa8.75□□□□□ -1.01
HDAC6-229ENST00000486665 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
HDAC6-229ENST00000486665 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
HDAC6-229ENST00000486665 URB1-AS1Q96HZ7 61 aa8.74□□□□□ -1.01
HDAC6-229ENST00000486665 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
HDAC6-229ENST00000486665 IGHV1-24A0A0C4DH33 117 aa8.73□□□□□ -1.01
HDAC6-229ENST00000486665 ESDP10768 282 aa8.73□□□□□ -1.01
HDAC6-229ENST00000486665 TMEM97Q5BJF2 176 aa8.73□□□□□ -1.01
HDAC6-229ENST00000486665 NIT1Q86X76 327 aa8.73□□□□□ -1.01
HDAC6-229ENST00000486665 KIR2DL4Q99706 377 aa8.73□□□□□ -1.01
HDAC6-229ENST00000486665 CHCHD7Q9BUK0 85 aa8.73□□□□□ -1.01
HDAC6-229ENST00000486665 NXT2Q9NPJ8 142 aaKnown RBP8.73□□□□□ -1.01
HDAC6-229ENST00000486665 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
HDAC6-229ENST00000486665 RYR1P21817 5038 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 TRBV25-1A0A075B6N4 114 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 FCER1GP30273 86 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 AMTP48728 403 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 Q0VG73 95 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 LGALS9CQ6DKI2 356 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 WFDC10BQ8IUB3 73 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 UBE2DNLQ8IWF7 75 aa8.72□□□□□ -1.01
HDAC6-229ENST00000486665 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-229ENST00000486665 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-229ENST00000486665 LINC01546A6NGU7 62 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 C1orf196B1AJZ1 125 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BKO60814 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BJP06899 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BOP23527 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BBP33778 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BDP58876 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BCP62807 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 GAGE6Q13070 117 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST2H2BEQ16778 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BHQ93079 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BNQ99877 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 HIST1H2BMQ99879 126 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 UPK3BQ9BT76 320 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 TMEM243Q9BU79 118 aa8.71□□□□□ -1.02
HDAC6-229ENST00000486665 LINC00614P0C842 121 aa8.7□□□□□ -1.02
HDAC6-229ENST00000486665 LAGE3Q14657 143 aa8.7□□□□□ -1.02
HDAC6-229ENST00000486665 FA2HQ7L5A8 372 aa8.7□□□□□ -1.02
HDAC6-229ENST00000486665 Q8N3U1 123 aa8.7□□□□□ -1.02
HDAC6-229ENST00000486665 TMEM262E9PQX1 116 aa8.69□□□□□ -1.02
HDAC6-229ENST00000486665 LINC00310P59036 64 aa8.69□□□□□ -1.02
HDAC6-229ENST00000486665 RNASEKQ6P5S7 137 aaKnown RBP8.69□□□□□ -1.02
HDAC6-229ENST00000486665 BAGE3Q86Y29 109 aa8.69□□□□□ -1.02
HDAC6-229ENST00000486665 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
HDAC6-229ENST00000486665 Q9H8V8 135 aa8.69□□□□□ -1.02
HDAC6-229ENST00000486665 PKD1P98161 4303 aa8.69□□□□□ -1.02
HDAC6-229ENST00000486665 NUPR1O60356 82 aa8.68□□□□□ -1.02
HDAC6-229ENST00000486665 RPL39P62891 51 aaKnown RBP8.68□□□□□ -1.02
HDAC6-229ENST00000486665 ORMDL2Q53FV1 153 aa8.68□□□□□ -1.02
HDAC6-229ENST00000486665 DYNC1H1Q14204 4646 aaKnown RBP8.68□□□□□ -1.02
HDAC6-229ENST00000486665 K7EMI3 77 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 SIVA1O15304 175 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 IGHV3-30-3P0DP02 117 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 RAB5BP61020 215 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
HDAC6-229ENST00000486665 UBE2L6O14933 153 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 SERF1AO75920 110 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 DNAH10OSP0CZ25 163 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 FGF6P10767 208 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 NDUFA6P56556 154 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 RBX1P62877 108 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 PMCHL1Q16048 86 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 MPV17L2Q567V2 206 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 Q8N976 141 aa8.66□□□□□ -1.02
HDAC6-229ENST00000486665 CHCHD1Q96BP2 118 aaKnown RBP8.66□□□□□ -1.02
HDAC6-229ENST00000486665 DNAH11Q96DT5 4516 aa8.65□□□□□ -1.02
HDAC6-229ENST00000486665 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
HDAC6-229ENST00000486665 A0A096LNJ9 63 aa8.65□□□□□ -1.02
HDAC6-229ENST00000486665 H7C423 109 aa8.65□□□□□ -1.02
HDAC6-229ENST00000486665 BTF3P20290 206 aaKnown RBP8.65□□□□□ -1.02
HDAC6-229ENST00000486665 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
HDAC6-229ENST00000486665 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.02
HDAC6-229ENST00000486665 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
HDAC6-229ENST00000486665 A0A087WX48 190 aa8.64□□□□□ -1.03
HDAC6-229ENST00000486665 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
HDAC6-229ENST00000486665 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms