RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 TIMM17BO60830 172 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 PITX3O75364 302 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 APOC2P02655 101 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 PMP2P02689 132 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 SAA1P0DJI8 122 aaPredicted RBP1.59□□□□□ -2.15
VPS41-213ENST00000485955 CRYGAP11844 174 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 CCL4P13236 92 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 NFYAP23511 347 aaPredicted RBP1.59□□□□□ -2.15
VPS41-213ENST00000485955 FUSP35637 526 aaKnown RBP eCLIP1.59□□□□□ -2.15
VPS41-213ENST00000485955 MPV17P39210 176 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 PCBD1P61457 104 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 SUPT4H1P63272 117 aaKnown RBP1.59□□□□□ -2.15
VPS41-213ENST00000485955 FUT5Q11128 374 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 CDK5R1Q15078 307 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 SS18Q15532 418 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 Q6ZQT7 251 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 LYZL2Q7Z4W2 148 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 Q8N2B8 174 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 SPANXA2-OT1Q8N9U9 137 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 CCL4L1Q8NHW4 92 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 MUC7Q8TAX7 377 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 CLEC2BQ92478 149 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 FGF13Q92913 245 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 AQP10Q96PS8 301 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 IMMP2LQ96T52 175 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 LINC00467Q9BRT7 94 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 VAMP8Q9BV40 100 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 AP4S1Q9Y587 144 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 CEP192Q8TEP8 1941 aa1.59□□□□□ -2.15
VPS41-213ENST00000485955 TRIP11Q15643 1979 aa1.59□□□□□ -2.16
VPS41-213ENST00000485955 DOCK4Q8N1I0 1966 aa1.59□□□□□ -2.16
VPS41-213ENST00000485955 BAZ2BQ9UIF8 2168 aaKnown RBP1.58□□□□□ -2.16
VPS41-213ENST00000485955 MUC2Q02817 5179 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 IGHV3-15A0A0B4J1V0 119 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 A0A1W2PRS3 328 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 TMEM262E9PQX1 116 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 H3BQ85 93 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 M0R2P5 195 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 CREBL2O60519 120 aaPredicted RBP1.58□□□□□ -2.16
VPS41-213ENST00000485955 ZNF737O75373 536 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 COX6A1P12074 109 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 CD24P25063 80 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 RPL28P46779 137 aaKnown RBP1.58□□□□□ -2.16
VPS41-213ENST00000485955 BLCAPP62952 87 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 MRPS36P82909 103 aaKnown RBP1.58□□□□□ -2.16
VPS41-213ENST00000485955 CIRBPQ14011 172 aaKnown RBP1.58□□□□□ -2.16
VPS41-213ENST00000485955 ZNF846Q147U1 533 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 FAM229BQ4G0N7 80 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.58□□□□□ -2.16
VPS41-213ENST00000485955 C6orf52Q5T4I8 152 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 MIC13Q5XKP0 118 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 DPPA3Q6W0C5 159 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 Q6ZS92 163 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 OR5AS1Q8N127 324 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 Q8NDZ9 215 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 C1orf64Q8NEQ6 169 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 OR4X2Q8NGF9 303 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 OR5AK2Q8NH90 309 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 AQP3Q92482 292 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 LSM10Q969L4 123 aaKnown RBP1.58□□□□□ -2.16
VPS41-213ENST00000485955 LYSTQ99698 3801 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 RETNLBQ9BQ08 111 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 DPY30Q9C005 99 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 BCL2L10Q9HD36 194 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 TAS2R4Q9NYW5 299 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 AKAP6Q13023 2319 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 TENM2Q9NT68 2774 aa1.58□□□□□ -2.16
VPS41-213ENST00000485955 ESPL1Q14674 2120 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 HECTD4Q9Y4D8 3996 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 DIDO1Q9BTC0 2240 aaKnown RBP1.57□□□□□ -2.16
VPS41-213ENST00000485955 TRAV7A0A075B6U4 112 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 SMIM31A0A1B0GVY4 71 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 A0A1W2PQD3 144 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 A6NN06 94 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 C17orf98A8MV24 154 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 OOSP1A8MZH6 123 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 LYRM1O43325 122 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 EDF1O60869 148 aaKnown RBP1.57□□□□□ -2.16
VPS41-213ENST00000485955 HYPMO75409 117 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 TRACP01848 142 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 IGLV7-43P04211 117 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 SHBGP04278 402 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 GYPBP06028 91 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 LINC00032P0C843 101 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 IGLC1P0CG04 106 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 ZNF705BP0CI00 300 aaPredicted RBP1.57□□□□□ -2.16
VPS41-213ENST00000485955 SLC25A4P12235 298 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 NPC2P61916 151 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 ZNF117Q03924 483 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 ASB16-AS1Q495Z4 193 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 CHCHD1Q96BP2 118 aaKnown RBP1.57□□□□□ -2.16
VPS41-213ENST00000485955 TMEM106BQ9NUM4 274 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 TPRKBQ9Y3C4 175 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 LINC00312Q9Y6C7 94 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 HRNRQ86YZ3 2850 aaPredicted RBP1.57□□□□□ -2.16
VPS41-213ENST00000485955 NCKAP5O14513 1909 aa1.57□□□□□ -2.16
VPS41-213ENST00000485955 CSMD3Q7Z407 3707 aa1.56□□□□□ -2.16
VPS41-213ENST00000485955 DSCAML1Q8TD84 2053 aa1.56□□□□□ -2.16
VPS41-213ENST00000485955 IGKV2-24A0A0C4DH68 120 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms