RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 RASL11AQ6T310 242 aa8.6□□□□□ -1.03
UBA3-210ENST00000485424 PRR34Q9NV39 138 aa8.6□□□□□ -1.03
UBA3-210ENST00000485424 IGLV10-54A0A075B6I4 117 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 PRSS1P07477 247 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 SULT1A2P50226 295 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 RPL37AP61513 92 aaKnown RBP8.59□□□□□ -1.03
UBA3-210ENST00000485424 LCE1DQ5T752 114 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 SERTAD4-AS1Q5TG53 156 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 WDR73Q6P4I2 378 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
UBA3-210ENST00000485424 TRAV8-4A0A0B4J246 113 aa8.58□□□□□ -1.04
UBA3-210ENST00000485424 NTF3P20783 257 aa8.58□□□□□ -1.04
UBA3-210ENST00000485424 COTL1Q14019 142 aa8.58□□□□□ -1.04
UBA3-210ENST00000485424 NIT2Q9NQR4 276 aa8.58□□□□□ -1.04
UBA3-210ENST00000485424 hDV102S1A0JD36 115 aa8.57□□□□□ -1.04
UBA3-210ENST00000485424 BCL2P10415 239 aa8.57□□□□□ -1.04
UBA3-210ENST00000485424 TAGLN2P37802 199 aaKnown RBP8.57□□□□□ -1.04
UBA3-210ENST00000485424 AMTP48728 403 aa8.57□□□□□ -1.04
UBA3-210ENST00000485424 TWIST1Q15672 202 aa8.57□□□□□ -1.04
UBA3-210ENST00000485424 SMIM15Q7Z3B0 74 aa8.57□□□□□ -1.04
UBA3-210ENST00000485424 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
UBA3-210ENST00000485424 DPH3Q96FX2 82 aa8.57□□□□□ -1.04
UBA3-210ENST00000485424 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.56□□□□□ -1.04
UBA3-210ENST00000485424 A0A1B0GUV1 79 aa8.56□□□□□ -1.04
UBA3-210ENST00000485424 OXTP01178 125 aa8.56□□□□□ -1.04
UBA3-210ENST00000485424 PGLYRP4Q96LB8 373 aa8.56□□□□□ -1.04
UBA3-210ENST00000485424 SLC51BQ86UW2 128 aa8.55□□□□□ -1.04
UBA3-210ENST00000485424 C20orf203Q8NBC4 194 aa8.55□□□□□ -1.04
UBA3-210ENST00000485424 NUDT10Q8NFP7 164 aa8.55□□□□□ -1.04
UBA3-210ENST00000485424 NUDT11Q96G61 164 aa8.55□□□□□ -1.04
UBA3-210ENST00000485424 RPP21Q9H633 154 aaKnown RBP8.55□□□□□ -1.04
UBA3-210ENST00000485424 IGLV4-60A0A075B6I1 120 aa8.54□□□□□ -1.04
UBA3-210ENST00000485424 IGKV3OR2-268A0A0C4DH90 116 aa8.54□□□□□ -1.04
UBA3-210ENST00000485424 AMMECR1LQ6DCA0 310 aa8.54□□□□□ -1.04
UBA3-210ENST00000485424 C9orf62Q8N4C0 152 aa8.54□□□□□ -1.04
UBA3-210ENST00000485424 TRBV20OR9-2A0A075B6H5 130 aa8.53□□□□□ -1.04
UBA3-210ENST00000485424 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
UBA3-210ENST00000485424 CTRLP40313 264 aa8.53□□□□□ -1.04
UBA3-210ENST00000485424 CFAP161Q6P656 301 aa8.53□□□□□ -1.04
UBA3-210ENST00000485424 KRTAP26-1Q6PEX3 210 aa8.53□□□□□ -1.04
UBA3-210ENST00000485424 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
UBA3-210ENST00000485424 TCTE3Q8IZS6 198 aa8.52□□□□□ -1.05
UBA3-210ENST00000485424 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
UBA3-210ENST00000485424 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
UBA3-210ENST00000485424 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
UBA3-210ENST00000485424 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
UBA3-210ENST00000485424 RNASEKQ6P5S7 137 aaKnown RBP8.51□□□□□ -1.05
UBA3-210ENST00000485424 TEX261Q6UWH6 196 aa8.51□□□□□ -1.05
UBA3-210ENST00000485424 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
UBA3-210ENST00000485424 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
UBA3-210ENST00000485424 APCSP02743 223 aa8.5□□□□□ -1.05
UBA3-210ENST00000485424 HNRNPA3P51991 378 aaKnown RBP8.5□□□□□ -1.05
UBA3-210ENST00000485424 CEBPGP53567 150 aa8.5□□□□□ -1.05
UBA3-210ENST00000485424 SDIM1Q6ZPB5 146 aa8.5□□□□□ -1.05
UBA3-210ENST00000485424 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
UBA3-210ENST00000485424 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
UBA3-210ENST00000485424 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
UBA3-210ENST00000485424 A8MWL6 223 aa8.49□□□□□ -1.05
UBA3-210ENST00000485424 NCR2O95944 276 aa8.49□□□□□ -1.05
UBA3-210ENST00000485424 BLOC1S1P78537 153 aa8.49□□□□□ -1.05
UBA3-210ENST00000485424 BTF3L4Q96K17 158 aa8.49□□□□□ -1.05
UBA3-210ENST00000485424 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
UBA3-210ENST00000485424 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
UBA3-210ENST00000485424 A6NJY4 79 aa8.48□□□□□ -1.05
UBA3-210ENST00000485424 K7EN84 100 aa8.48□□□□□ -1.05
UBA3-210ENST00000485424 PMCHP20382 165 aa8.48□□□□□ -1.05
UBA3-210ENST00000485424 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
UBA3-210ENST00000485424 RNF185Q96GF1 192 aa8.48□□□□□ -1.05
UBA3-210ENST00000485424 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
UBA3-210ENST00000485424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
UBA3-210ENST00000485424 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
UBA3-210ENST00000485424 TMEM250H0YL14 139 aa8.47□□□□□ -1.05
UBA3-210ENST00000485424 H7C423 109 aa8.47□□□□□ -1.05
UBA3-210ENST00000485424 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
UBA3-210ENST00000485424 PANO1I0J062 215 aa8.46□□□□□ -1.06
UBA3-210ENST00000485424 RPS10P46783 165 aaKnown RBP8.46□□□□□ -1.06
UBA3-210ENST00000485424 HIGD2BQ4VC39 106 aa8.46□□□□□ -1.06
UBA3-210ENST00000485424 ALKAL2Q6UX46 152 aa8.46□□□□□ -1.06
UBA3-210ENST00000485424 Q6ZNX1 250 aa8.46□□□□□ -1.06
UBA3-210ENST00000485424 AKAP14Q86UN6 197 aa8.46□□□□□ -1.06
UBA3-210ENST00000485424 C7orf33Q8WU49 177 aa8.46□□□□□ -1.06
UBA3-210ENST00000485424 CHCHD10Q8WYQ3 142 aaPredicted RBP8.46□□□□□ -1.06
UBA3-210ENST00000485424 A0A087WYN8 130 aa8.45□□□□□ -1.06
UBA3-210ENST00000485424 I3L3M4 83 aa8.45□□□□□ -1.06
UBA3-210ENST00000485424 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
UBA3-210ENST00000485424 FGF6P10767 208 aa8.45□□□□□ -1.06
UBA3-210ENST00000485424 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
UBA3-210ENST00000485424 CIRBPQ14011 172 aaKnown RBP8.45□□□□□ -1.06
UBA3-210ENST00000485424 FAM231DQ6ZW35 169 aa8.45□□□□□ -1.06
UBA3-210ENST00000485424 GTSF1Q8WW33 167 aa8.45□□□□□ -1.06
UBA3-210ENST00000485424 EIF5A2Q9GZV4 153 aaKnown RBP8.45□□□□□ -1.06
UBA3-210ENST00000485424 FOXA3P55318 350 aaPredicted RBP8.44□□□□□ -1.06
UBA3-210ENST00000485424 COX6A2Q02221 97 aa8.44□□□□□ -1.06
UBA3-210ENST00000485424 Q6ZRU5 148 aa8.44□□□□□ -1.06
UBA3-210ENST00000485424 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
UBA3-210ENST00000485424 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
UBA3-210ENST00000485424 ST20Q9HBF5 79 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms