RNA–Protein interactions for RNA: ENST00000484986.1

PTPRN-215, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-215ENST00000484986 PANO1I0J062 215 aa14.16□□□□□ -0.14
PTPRN-215ENST00000484986 UBE2L6O14933 153 aa14.16□□□□□ -0.14
PTPRN-215ENST00000484986 HNRNPA3P51991 378 aaKnown RBP14.16□□□□□ -0.14
PTPRN-215ENST00000484986 CIRBPQ14011 172 aaKnown RBP14.16□□□□□ -0.14
PTPRN-215ENST00000484986 UBR4Q5T4S7 5183 aa14.16□□□□□ -0.14
PTPRN-215ENST00000484986 PDE6DO43924 150 aa14.15□□□□□ -0.14
PTPRN-215ENST00000484986 IFNA1P01562 189 aa14.15□□□□□ -0.14
PTPRN-215ENST00000484986 WDR73Q6P4I2 378 aa14.15□□□□□ -0.14
PTPRN-215ENST00000484986 DPH3Q96FX2 82 aa14.15□□□□□ -0.14
PTPRN-215ENST00000484986 RNF185Q96GF1 192 aa14.15□□□□□ -0.14
PTPRN-215ENST00000484986 DPH3P1Q9H4G8 78 aa14.15□□□□□ -0.14
PTPRN-215ENST00000484986 IGLV4-60A0A075B6I1 120 aa14.14□□□□□ -0.15
PTPRN-215ENST00000484986 COTL1Q14019 142 aa14.13□□□□□ -0.15
PTPRN-215ENST00000484986 Q6ZRU5 148 aa14.13□□□□□ -0.15
PTPRN-215ENST00000484986 RAB19A4D1S5 217 aa14.12□□□□□ -0.15
PTPRN-215ENST00000484986 NTF3P20783 257 aa14.12□□□□□ -0.15
PTPRN-215ENST00000484986 AMTP48728 403 aa14.12□□□□□ -0.15
PTPRN-215ENST00000484986 SULT1A2P50226 295 aa14.12□□□□□ -0.15
PTPRN-215ENST00000484986 MEF2BQ02080 365 aaPredicted RBP14.12□□□□□ -0.15
PTPRN-215ENST00000484986 LYZL1Q6UWQ5 148 aa14.12□□□□□ -0.15
PTPRN-215ENST00000484986 CFAP161Q6P656 301 aa14.11□□□□□ -0.15
PTPRN-215ENST00000484986 GFRA4Q9GZZ7 299 aa14.11□□□□□ -0.15
PTPRN-215ENST00000484986 MED9Q9NWA0 146 aa14.1□□□□□ -0.15
PTPRN-215ENST00000484986 CTRLP40313 264 aa14.09□□□□□ -0.15
PTPRN-215ENST00000484986 A0A087WYN8 130 aa14.08□□□□□ -0.16
PTPRN-215ENST00000484986 SLPIP03973 132 aa14.08□□□□□ -0.16
PTPRN-215ENST00000484986 SPACA4Q8TDM5 124 aa14.08□□□□□ -0.16
PTPRN-215ENST00000484986 TWIST1Q15672 202 aa14.07□□□□□ -0.16
PTPRN-215ENST00000484986 TRBV20OR9-2A0A075B6H5 130 aa14.06□□□□□ -0.16
PTPRN-215ENST00000484986 ALKAL2Q6UX46 152 aa14.06□□□□□ -0.16
PTPRN-215ENST00000484986 NUDT10Q8NFP7 164 aa14.06□□□□□ -0.16
PTPRN-215ENST00000484986 NUDT11Q96G61 164 aa14.06□□□□□ -0.16
PTPRN-215ENST00000484986 CNFNQ9BYD5 112 aa14.06□□□□□ -0.16
PTPRN-215ENST00000484986 GAGE12HA6NDE8 117 aa14.05□□□□□ -0.16
PTPRN-215ENST00000484986 CHTF8P0CG12 524 aa14.05□□□□□ -0.16
PTPRN-215ENST00000484986 BCL2P10415 239 aa14.05□□□□□ -0.16
PTPRN-215ENST00000484986 TAGLN2P37802 199 aaKnown RBP14.05□□□□□ -0.16
PTPRN-215ENST00000484986 PLAC8Q9NZF1 115 aa14.05□□□□□ -0.16
PTPRN-215ENST00000484986 MT1HL1P0DM35 61 aa14.04□□□□□ -0.16
PTPRN-215ENST00000484986 AMMECR1LQ6DCA0 310 aa14.04□□□□□ -0.16
PTPRN-215ENST00000484986 SMIM15Q7Z3B0 74 aa14.04□□□□□ -0.16
PTPRN-215ENST00000484986 C7orf33Q8WU49 177 aa14.04□□□□□ -0.16
PTPRN-215ENST00000484986 NCR2O95944 276 aa14.03□□□□□ -0.16
PTPRN-215ENST00000484986 RPS10P46783 165 aaKnown RBP14.03□□□□□ -0.16
PTPRN-215ENST00000484986 C15orf56Q8N910 161 aa14.03□□□□□ -0.16
PTPRN-215ENST00000484986 GATD1Q8NB37 220 aa14.03□□□□□ -0.16
PTPRN-215ENST00000484986 RPP21Q9H633 154 aaKnown RBP14.03□□□□□ -0.16
PTPRN-215ENST00000484986 IGKV3OR2-268A0A0C4DH90 116 aa14.02□□□□□ -0.17
PTPRN-215ENST00000484986 H7C423 109 aa14.02□□□□□ -0.17
PTPRN-215ENST00000484986 TEX261Q6UWH6 196 aa14.02□□□□□ -0.17
PTPRN-215ENST00000484986 BLOC1S1P78537 153 aa14.01□□□□□ -0.17
PTPRN-215ENST00000484986 COX6A2Q02221 97 aa14.01□□□□□ -0.17
PTPRN-215ENST00000484986 TRAV26-2A0A0B4J265 109 aa14□□□□□ -0.17
PTPRN-215ENST00000484986 NDUFS6O75380 124 aaKnown RBP14□□□□□ -0.17
PTPRN-215ENST00000484986 CHCHD10Q8WYQ3 142 aaPredicted RBP14□□□□□ -0.17
PTPRN-215ENST00000484986 APCSP02743 223 aa13.99□□□□□ -0.17
PTPRN-215ENST00000484986 RNASEKQ6P5S7 137 aaKnown RBP13.99□□□□□ -0.17
PTPRN-215ENST00000484986 PHOX2AO14813 284 aa13.98□□□□□ -0.17
PTPRN-215ENST00000484986 HIGD2BQ4VC39 106 aa13.98□□□□□ -0.17
PTPRN-215ENST00000484986 RNASE7Q9H1E1 156 aaKnown RBP13.98□□□□□ -0.17
PTPRN-215ENST00000484986 GVQW2A0A096LPI5 108 aaPredicted RBP13.97□□□□□ -0.17
PTPRN-215ENST00000484986 MAJINQ3KP22 176 aa13.97□□□□□ -0.17
PTPRN-215ENST00000484986 PKIGQ9Y2B9 76 aa13.97□□□□□ -0.17
PTPRN-215ENST00000484986 K7EN84 100 aa13.96□□□□□ -0.17
PTPRN-215ENST00000484986 FGF6P10767 208 aa13.96□□□□□ -0.17
PTPRN-215ENST00000484986 ZNF25P17030 456 aaPredicted RBP13.96□□□□□ -0.17
PTPRN-215ENST00000484986 OCC1Q8TAD7 63 aa13.96□□□□□ -0.17
PTPRN-215ENST00000484986 RPL39LQ96EH5 51 aaKnown RBP13.96□□□□□ -0.17
PTPRN-215ENST00000484986 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.95□□□□□ -0.18
PTPRN-215ENST00000484986 IGKV2-29A2NJV5 120 aaPredicted RBP13.95□□□□□ -0.18
PTPRN-215ENST00000484986 SDHAF1A6NFY7 115 aa13.95□□□□□ -0.18
PTPRN-215ENST00000484986 PRSS3P2Q8NHM4 247 aa13.95□□□□□ -0.18
PTPRN-215ENST00000484986 GTSF1Q8WW33 167 aa13.95□□□□□ -0.18
PTPRN-215ENST00000484986 BTF3L4Q96K17 158 aa13.95□□□□□ -0.18
PTPRN-215ENST00000484986 LINC00474Q9P2X8 69 aa13.95□□□□□ -0.18
PTPRN-215ENST00000484986 IGKV2-24A0A0C4DH68 120 aa13.94□□□□□ -0.18
PTPRN-215ENST00000484986 OR5A1Q8NGJ0 315 aa13.94□□□□□ -0.18
PTPRN-215ENST00000484986 TMEM101Q96IK0 257 aa13.94□□□□□ -0.18
PTPRN-215ENST00000484986 FAM210AQ96ND0 272 aa13.94□□□□□ -0.18
PTPRN-215ENST00000484986 I3L3M4 83 aa13.93□□□□□ -0.18
PTPRN-215ENST00000484986 PMCHP20382 165 aa13.93□□□□□ -0.18
PTPRN-215ENST00000484986 STPG4Q8N801 248 aa13.93□□□□□ -0.18
PTPRN-215ENST00000484986 TNXBP22105 4242 aa13.93□□□□□ -0.18
PTPRN-215ENST00000484986 FOXI1Q12951 378 aa13.92□□□□□ -0.18
PTPRN-215ENST00000484986 TRBV6-5A0A0K0K1A5 114 aa13.91□□□□□ -0.18
PTPRN-215ENST00000484986 A8MWL6 223 aa13.91□□□□□ -0.18
PTPRN-215ENST00000484986 GATCO43716 136 aaKnown RBP13.91□□□□□ -0.18
PTPRN-215ENST00000484986 FOXA3P55318 350 aaPredicted RBP13.91□□□□□ -0.18
PTPRN-215ENST00000484986 PRR3P79522 188 aaKnown RBP13.91□□□□□ -0.18
PTPRN-215ENST00000484986 XCL1P47992 114 aa13.9□□□□□ -0.18
PTPRN-215ENST00000484986 BORCS7Q96B45 105 aa13.9□□□□□ -0.18
PTPRN-215ENST00000484986 IGHV1-58A0A0C4DH39 117 aa13.89□□□□□ -0.19
PTPRN-215ENST00000484986 TMEM250H0YL14 139 aa13.89□□□□□ -0.19
PTPRN-215ENST00000484986 FAM231DQ6ZW35 169 aa13.89□□□□□ -0.19
PTPRN-215ENST00000484986 LINC00959A0A1B0GUT2 108 aa13.88□□□□□ -0.19
PTPRN-215ENST00000484986 CT83Q5H943 113 aa13.88□□□□□ -0.19
PTPRN-215ENST00000484986 MRAP2Q96G30 205 aa13.88□□□□□ -0.19
PTPRN-215ENST00000484986 LINC01600Q96MT4 127 aa13.88□□□□□ -0.19
PTPRN-215ENST00000484986 ST20Q9HBF5 79 aa13.88□□□□□ -0.19
PTPRN-215ENST00000484986 A0A096LNI7 61 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms