RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TEX261Q6UWH6 196 aa4.09□□□□□ -1.75
PTCD3-215ENST00000484203 SMIM15Q7Z3B0 74 aa4.09□□□□□ -1.75
PTCD3-215ENST00000484203 C9orf62Q8N4C0 152 aa4.09□□□□□ -1.75
PTCD3-215ENST00000484203 CHCHD5Q9BSY4 110 aa4.09□□□□□ -1.75
PTCD3-215ENST00000484203 TPPP3Q9BW30 176 aa4.09□□□□□ -1.75
PTCD3-215ENST00000484203 KLK12Q9UKR0 248 aa4.09□□□□□ -1.75
PTCD3-215ENST00000484203 SRRM2Q9UQ35 2752 aaKnown RBP4.08□□□□□ -1.76
PTCD3-215ENST00000484203 IGKV2D-24A0A075B6R9 120 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 IGHV1-24A0A0C4DH33 117 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 C19orf71A6NCJ1 209 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 IGLC6P0CF74 106 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 XGP55808 180 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 RPL19P84098 196 aaKnown RBP4.08□□□□□ -1.76
PTCD3-215ENST00000484203 NEXN-AS1Q8NBZ9 246 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 UBE2WQ96B02 151 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 DERL1Q9BUN8 251 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 DPH3P1Q9H4G8 78 aa4.08□□□□□ -1.76
PTCD3-215ENST00000484203 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
PTCD3-215ENST00000484203 TRAV8-4A0A0B4J246 113 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 M0QY20 66 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 IGLV2-8P01709 118 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 ANGP03950 147 aaKnown RBP4.07□□□□□ -1.76
PTCD3-215ENST00000484203 GZMBP10144 247 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 IQCJQ1A5X6 159 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 DGAT2L7PQ6IED9 249 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 RASL11AQ6T310 242 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 BORCS7Q96B45 105 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 PGLYRP4Q96LB8 373 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 CNFNQ9BYD5 112 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 RPP21Q9H633 154 aaKnown RBP4.07□□□□□ -1.76
PTCD3-215ENST00000484203 NIT2Q9NQR4 276 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 Q9UF83 564 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 KIF25-AS1Q9Y6Z4 181 aa4.07□□□□□ -1.76
PTCD3-215ENST00000484203 A0A1B0GUV1 79 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 RAB19A4D1S5 217 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 A8MWL6 223 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 MGPP08493 103 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 INAFM2P0DMQ5 153 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 NTF3P20783 257 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 CTRLP40313 264 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 COTL1Q14019 142 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 TWIST1Q15672 202 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 Q5VSD8 79 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 LYZL1Q6UWQ5 148 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 C15orf54Q8N8G6 183 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 BAALCQ8WXS3 180 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 TMEM243Q9BU79 118 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 PRR34Q9NV39 138 aa4.06□□□□□ -1.76
PTCD3-215ENST00000484203 TRBV20OR9-2A0A075B6H5 130 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 MUC21A0A0G2JKD1 596 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 MUC21A0A140T8X8 626 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 FAM231BA6NCW3 169 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 H7C423 109 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 UBE2L6O14933 153 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 NCR2O95944 276 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 SSTP61278 116 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 RBX1P62877 108 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 MPV17L2Q567V2 206 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 Q6ZSA8 131 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 FAM231DQ6ZW35 169 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 Q8N9P0 234 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-215ENST00000484203 LYPD6BQ8NI32 183 aa4.05□□□□□ -1.76
PTCD3-215ENST00000484203 GATCO43716 136 aaKnown RBP4.04□□□□□ -1.76
PTCD3-215ENST00000484203 PPP1R17O96001 155 aa4.04□□□□□ -1.76
PTCD3-215ENST00000484203 NKX2-5P52952 324 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-215ENST00000484203 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-215ENST00000484203 FAM74A3Q4VXF1 159 aa4.04□□□□□ -1.76
PTCD3-215ENST00000484203 CFAP161Q6P656 301 aa4.04□□□□□ -1.76
PTCD3-215ENST00000484203 ENHOQ6UWT2 76 aa4.04□□□□□ -1.76
PTCD3-215ENST00000484203 ALKAL2Q6UX46 152 aa4.04□□□□□ -1.76
PTCD3-215ENST00000484203 OCC1Q8TAD7 63 aa4.04□□□□□ -1.76
PTCD3-215ENST00000484203 EIF5A2Q9GZV4 153 aaKnown RBP4.04□□□□□ -1.76
PTCD3-215ENST00000484203 GFRA4Q9GZZ7 299 aa4.04□□□□□ -1.76
PTCD3-215ENST00000484203 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-215ENST00000484203 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-215ENST00000484203 LECT2O14960 151 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 FUSP35637 526 aaKnown RBP eCLIP4.03□□□□□ -1.76
PTCD3-215ENST00000484203 AMTP48728 403 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 REG3AQ06141 175 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 SMAGPQ0VAQ4 97 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 GAGE6Q13070 117 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 LINC00269Q8N2A0 174 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 TSKUQ8WUA8 353 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 SMIM7Q9BQ49 75 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 CHAC1Q9BUX1 264 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 RNASE7Q9H1E1 156 aaKnown RBP4.03□□□□□ -1.76
PTCD3-215ENST00000484203 SMDT1Q9H4I9 107 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 PKIGQ9Y2B9 76 aa4.03□□□□□ -1.76
PTCD3-215ENST00000484203 A0A1B0GUT8 65 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 K7EN84 100 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 HLA-DQA1P01909 254 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 SMR3BP02814 79 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-215ENST00000484203 ZNF25P17030 456 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-215ENST00000484203 WFDC2Q14508 124 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 AMMECR1LQ6DCA0 310 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms