RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PYGO1Q9Y3Y4 419 aa14.48□□□□□ -0.09
RPUSD3-216ENST00000484134 SPANXDQ9BXN6 97 aa14.47□□□□□ -0.09
RPUSD3-216ENST00000484134 SPANXCQ9NY87 97 aa14.47□□□□□ -0.09
RPUSD3-216ENST00000484134 DUX3Q96PT4 197 aa14.47□□□□□ -0.09
RPUSD3-216ENST00000484134 CREBBPQ92793 2442 aa14.46□□□□□ -0.09
RPUSD3-216ENST00000484134 CFHR3Q02985 330 aa14.46□□□□□ -0.09
RPUSD3-216ENST00000484134 MIAQ16674 131 aa14.46□□□□□ -0.09
RPUSD3-216ENST00000484134 CSPG4Q6UVK1 2322 aa14.46□□□□□ -0.1
RPUSD3-216ENST00000484134 VSIG2Q96IQ7 327 aa14.46□□□□□ -0.1
RPUSD3-216ENST00000484134 C10orf99Q6UWK7 81 aa14.44□□□□□ -0.1
RPUSD3-216ENST00000484134 RBMY1A1P0DJD3 496 aaKnown RBP14.44□□□□□ -0.1
RPUSD3-216ENST00000484134 RBMY1CP0DJD4 496 aa14.44□□□□□ -0.1
RPUSD3-216ENST00000484134 KLRB1Q12918 225 aa14.44□□□□□ -0.1
RPUSD3-216ENST00000484134 RBMY1FQ15415 496 aaKnown RBP14.44□□□□□ -0.1
RPUSD3-216ENST00000484134 TMEM61Q8N0U2 210 aa14.44□□□□□ -0.1
RPUSD3-216ENST00000484134 IGHV4-61A0A0C4DH41 118 aa14.43□□□□□ -0.1
RPUSD3-216ENST00000484134 H3BT86 120 aa14.43□□□□□ -0.1
RPUSD3-216ENST00000484134 K7EQG2 157 aa14.43□□□□□ -0.1
RPUSD3-216ENST00000484134 PRM2P04554 102 aa14.43□□□□□ -0.1
RPUSD3-216ENST00000484134 DAND5Q8N907 189 aa14.43□□□□□ -0.1
RPUSD3-216ENST00000484134 LST1O00453 97 aa14.43□□□□□ -0.1
RPUSD3-216ENST00000484134 CELSR2Q9HCU4 2923 aa14.43□□□□□ -0.1
RPUSD3-216ENST00000484134 SNRPD3P62318 126 aaKnown RBP14.42□□□□□ -0.1
RPUSD3-216ENST00000484134 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
RPUSD3-216ENST00000484134 COX6CP09669 75 aa14.42□□□□□ -0.1
RPUSD3-216ENST00000484134 HTN1P15515 57 aa14.42□□□□□ -0.1
RPUSD3-216ENST00000484134 SPG11Q96JI7 2443 aa14.41□□□□□ -0.1
RPUSD3-216ENST00000484134 Q6ZSN1 163 aa14.41□□□□□ -0.1
RPUSD3-216ENST00000484134 KNCNA6PVL3 124 aa14.41□□□□□ -0.1
RPUSD3-216ENST00000484134 TINCRA0A1B0GVN0 87 aa14.4□□□□□ -0.1
RPUSD3-216ENST00000484134 DEFB121Q5J5C9 76 aa14.4□□□□□ -0.1
RPUSD3-216ENST00000484134 CHCHD7Q9BUK0 85 aa14.4□□□□□ -0.1
RPUSD3-216ENST00000484134 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.39□□□□□ -0.11
RPUSD3-216ENST00000484134 IGKV2-29A2NJV5 120 aaPredicted RBP14.39□□□□□ -0.11
RPUSD3-216ENST00000484134 UBE2D4Q9Y2X8 147 aa14.39□□□□□ -0.11
RPUSD3-216ENST00000484134 C19orf84I3L1E1 186 aa14.38□□□□□ -0.11
RPUSD3-216ENST00000484134 PSMB8P28062 276 aa14.38□□□□□ -0.11
RPUSD3-216ENST00000484134 TRGV11A0A075B6L2 103 aa14.38□□□□□ -0.11
RPUSD3-216ENST00000484134 CITED2Q99967 270 aaPredicted RBP14.38□□□□□ -0.11
RPUSD3-216ENST00000484134 EDA2RQ9HAV5 297 aa14.38□□□□□ -0.11
RPUSD3-216ENST00000484134 TNFRSF18Q9Y5U5 241 aa14.38□□□□□ -0.11
RPUSD3-216ENST00000484134 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.37□□□□□ -0.11
RPUSD3-216ENST00000484134 FAM240AA0A1B0GVK7 77 aa14.36□□□□□ -0.11
RPUSD3-216ENST00000484134 MRPL23Q16540 153 aaKnown RBP14.36□□□□□ -0.11
RPUSD3-216ENST00000484134 DUX5Q96PT3 197 aa14.36□□□□□ -0.11
RPUSD3-216ENST00000484134 CHCHD5Q9BSY4 110 aa14.36□□□□□ -0.11
RPUSD3-216ENST00000484134 LINC00467Q9BRT7 94 aa14.36□□□□□ -0.11
RPUSD3-216ENST00000484134 CDKN2A-AS1Q9UH64 79 aa14.36□□□□□ -0.11
RPUSD3-216ENST00000484134 SYNJ2BPP57105 145 aa14.35□□□□□ -0.11
RPUSD3-216ENST00000484134 SMIM20Q8N5G0 67 aa14.34□□□□□ -0.11
RPUSD3-216ENST00000484134 YAE1D1Q9NRH1 226 aa14.34□□□□□ -0.11
RPUSD3-216ENST00000484134 IGHV3-38A0A0C4DH36 116 aa14.34□□□□□ -0.11
RPUSD3-216ENST00000484134 AVPP01185 164 aa14.34□□□□□ -0.11
RPUSD3-216ENST00000484134 SPANXA1Q9NS26 97 aa14.34□□□□□ -0.11
RPUSD3-216ENST00000484134 MEIG1Q5JSS6 88 aa14.33□□□□□ -0.12
RPUSD3-216ENST00000484134 RNF152Q8N8N0 203 aa14.33□□□□□ -0.12
RPUSD3-216ENST00000484134 TIMM17BO60830 172 aa14.33□□□□□ -0.12
RPUSD3-216ENST00000484134 TMEM101Q96IK0 257 aa14.33□□□□□ -0.12
RPUSD3-216ENST00000484134 TRBV7-7A0A0K0K1E9 115 aa14.32□□□□□ -0.12
RPUSD3-216ENST00000484134 COX6A2Q02221 97 aa14.31□□□□□ -0.12
RPUSD3-216ENST00000484134 NDUFA1O15239 70 aa14.31□□□□□ -0.12
RPUSD3-216ENST00000484134 C3orf56Q8N813 242 aa14.31□□□□□ -0.12
RPUSD3-216ENST00000484134 A0A0U1RRA0 63 aa14.3□□□□□ -0.12
RPUSD3-216ENST00000484134 ZNF625Q96I27 306 aaPredicted RBP14.3□□□□□ -0.12
RPUSD3-216ENST00000484134 PIMREGQ9BSJ6 248 aa14.3□□□□□ -0.12
RPUSD3-216ENST00000484134 NCOR2Q9Y618 2525 aa14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 LINC00308Q8TCZ7 52 aa14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 RBMY1BA6NDE4 496 aaKnown RBP14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 RBMY1EA6NEQ0 496 aaKnown RBP14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 RBMY1DP0C7P1 496 aaKnown RBP14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 HERV-K104P63124 156 aa14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 Q8N2B8 174 aa14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 C10orf105Q8TEF2 133 aa14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 FAM110AQ9BQ89 295 aa14.29□□□□□ -0.12
RPUSD3-216ENST00000484134 IGHV4-59P01825 116 aa14.28□□□□□ -0.12
RPUSD3-216ENST00000484134 IGLV5-45A0A087WSX0 123 aa14.27□□□□□ -0.12
RPUSD3-216ENST00000484134 SMCR5Q8TEV8 140 aa14.27□□□□□ -0.12
RPUSD3-216ENST00000484134 IGHV4-30-2A0A087WSY4 118 aa14.27□□□□□ -0.13
RPUSD3-216ENST00000484134 SOSTDC1Q6X4U4 206 aa14.27□□□□□ -0.13
RPUSD3-216ENST00000484134 CSMD2Q7Z408 3487 aa14.27□□□□□ -0.13
RPUSD3-216ENST00000484134 SHISA2Q6UWI4 295 aa14.26□□□□□ -0.13
RPUSD3-216ENST00000484134 Q9H8V8 135 aa14.26□□□□□ -0.13
RPUSD3-216ENST00000484134 TIRAPP58753 221 aa14.26□□□□□ -0.13
RPUSD3-216ENST00000484134 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
RPUSD3-216ENST00000484134 IGHV3OR16-12A0A075B7B8 117 aa14.25□□□□□ -0.13
RPUSD3-216ENST00000484134 SPTBN4Q9H254 2564 aa14.25□□□□□ -0.13
RPUSD3-216ENST00000484134 MSMBP08118 114 aa14.25□□□□□ -0.13
RPUSD3-216ENST00000484134 DEFB131AP59861 70 aa14.25□□□□□ -0.13
RPUSD3-216ENST00000484134 LINC01587Q99440 93 aa14.25□□□□□ -0.13
RPUSD3-216ENST00000484134 COX7A2LO14548 114 aa14.24□□□□□ -0.13
RPUSD3-216ENST00000484134 HOXD3P31249 432 aaPredicted RBP14.24□□□□□ -0.13
RPUSD3-216ENST00000484134 IGLV5-39A0A0G2JS06 123 aa14.23□□□□□ -0.13
RPUSD3-216ENST00000484134 FAM236AA0A1B0GUQ0 79 aa14.23□□□□□ -0.13
RPUSD3-216ENST00000484134 FAM236BA0A1B0GV22 79 aa14.23□□□□□ -0.13
RPUSD3-216ENST00000484134 NDUFA7O95182 113 aa14.23□□□□□ -0.13
RPUSD3-216ENST00000484134 ZANQ9Y493 2812 aa14.23□□□□□ -0.13
RPUSD3-216ENST00000484134 CIRBPQ14011 172 aaKnown RBP14.23□□□□□ -0.13
RPUSD3-216ENST00000484134 C22orf24Q9Y442 160 aa14.23□□□□□ -0.13
RPUSD3-216ENST00000484134 IGHV3-53P01767 116 aa14.22□□□□□ -0.13
RPUSD3-216ENST00000484134 LINC00242Q5T6M2 205 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms