RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 UCNP55089 124 aa10.6□□□□□ -0.71
CCDC78-211ENST00000481804 DUX5Q96PT3 197 aa10.6□□□□□ -0.71
CCDC78-211ENST00000481804 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
CCDC78-211ENST00000481804 ICOSQ9Y6W8 199 aa10.59□□□□□ -0.71
CCDC78-211ENST00000481804 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
CCDC78-211ENST00000481804 CRLF1O75462 422 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 IGLV1-40P01703 118 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 SYNJ2BPP57105 145 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 C15orf53Q8NAA6 179 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 A8MZ25 164 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 CITED1Q99966 193 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
CCDC78-211ENST00000481804 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
CCDC78-211ENST00000481804 NDUFV3P56181 108 aaKnown RBP10.57□□□□□ -0.72
CCDC78-211ENST00000481804 PROK1P58294 105 aa10.57□□□□□ -0.72
CCDC78-211ENST00000481804 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
CCDC78-211ENST00000481804 IFITM1P13164 125 aa10.57□□□□□ -0.72
CCDC78-211ENST00000481804 Q6ZSV7 163 aa10.57□□□□□ -0.72
CCDC78-211ENST00000481804 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
CCDC78-211ENST00000481804 M0QXV9 152 aa10.56□□□□□ -0.72
CCDC78-211ENST00000481804 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
CCDC78-211ENST00000481804 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
CCDC78-211ENST00000481804 BRI3O95415 125 aa10.56□□□□□ -0.72
CCDC78-211ENST00000481804 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
CCDC78-211ENST00000481804 C19orf84I3L1E1 186 aa10.56□□□□□ -0.72
CCDC78-211ENST00000481804 K7EQG2 157 aa10.55□□□□□ -0.72
CCDC78-211ENST00000481804 DAND5Q8N907 189 aa10.55□□□□□ -0.72
CCDC78-211ENST00000481804 TLN2Q9Y4G6 2542 aa10.55□□□□□ -0.72
CCDC78-211ENST00000481804 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.55□□□□□ -0.72
CCDC78-211ENST00000481804 IGKV2-29A2NJV5 120 aaPredicted RBP10.55□□□□□ -0.72
CCDC78-211ENST00000481804 ATP5J2P56134 94 aa10.55□□□□□ -0.72
CCDC78-211ENST00000481804 DUX3Q96PT4 197 aa10.55□□□□□ -0.72
CCDC78-211ENST00000481804 RPL13AP40429 203 aaKnown RBP10.54□□□□□ -0.72
CCDC78-211ENST00000481804 DGAT2L7PQ6IED9 249 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 CCL19Q99731 98 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 SETD2Q9BYW2 2564 aaPredicted RBP10.54□□□□□ -0.72
CCDC78-211ENST00000481804 GAGE12JA6NER3 117 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 GAGE7O76087 117 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 GAGE12FP0CL80 117 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 GAGE12GP0CL81 117 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 GAGE12IP0CL82 117 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 MRPS36P82909 103 aaKnown RBP10.54□□□□□ -0.72
CCDC78-211ENST00000481804 GAGE4Q13068 117 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 C2CD3Q4AC94 2353 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 IGHV3-38A0A0C4DH36 116 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 A0A0U1RRA0 63 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 MIAQ16674 131 aa10.54□□□□□ -0.72
CCDC78-211ENST00000481804 H7C423 109 aa10.53□□□□□ -0.72
CCDC78-211ENST00000481804 PRM2P04554 102 aa10.53□□□□□ -0.72
CCDC78-211ENST00000481804 YAE1D1Q9NRH1 226 aa10.53□□□□□ -0.72
CCDC78-211ENST00000481804 IGSF10Q6WRI0 2623 aa10.53□□□□□ -0.72
CCDC78-211ENST00000481804 MSMBP08118 114 aa10.53□□□□□ -0.72
CCDC78-211ENST00000481804 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
CCDC78-211ENST00000481804 VSIG2Q96IQ7 327 aa10.52□□□□□ -0.72
CCDC78-211ENST00000481804 LITAFQ99732 161 aa10.52□□□□□ -0.72
CCDC78-211ENST00000481804 ZANQ9Y493 2812 aa10.52□□□□□ -0.72
CCDC78-211ENST00000481804 IGHV4-59P01825 116 aa10.52□□□□□ -0.73
CCDC78-211ENST00000481804 NHLRC4P0CG21 123 aaPredicted RBP10.52□□□□□ -0.73
CCDC78-211ENST00000481804 PSMB8P28062 276 aa10.52□□□□□ -0.73
CCDC78-211ENST00000481804 IGHV4-30-2A0A087WSY4 118 aa10.51□□□□□ -0.73
CCDC78-211ENST00000481804 H3BT86 120 aa10.51□□□□□ -0.73
CCDC78-211ENST00000481804 ZNF625Q96I27 306 aaPredicted RBP10.51□□□□□ -0.73
CCDC78-211ENST00000481804 SPANXDQ9BXN6 97 aa10.51□□□□□ -0.73
CCDC78-211ENST00000481804 SPANXCQ9NY87 97 aa10.51□□□□□ -0.73
CCDC78-211ENST00000481804 CCDC179H3BU77 68 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 DEFB131AP59861 70 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
CCDC78-211ENST00000481804 C10orf105Q8TEF2 133 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 Q9UF83 564 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 CFHR3Q02985 330 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 EPG5Q9HCE0 2579 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 LRRK2Q5S007 2527 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 TINCRA0A1B0GVN0 87 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 SPANXA1Q9NS26 97 aa10.5□□□□□ -0.73
CCDC78-211ENST00000481804 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
CCDC78-211ENST00000481804 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 RBMY1FQ15415 496 aaKnown RBP10.48□□□□□ -0.73
CCDC78-211ENST00000481804 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 MYO9AB2RTY4 2548 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 AVPP01185 164 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 GNLYP22749 145 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 LST1O00453 97 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
CCDC78-211ENST00000481804 UBE2D4Q9Y2X8 147 aa10.48□□□□□ -0.73
CCDC78-211ENST00000481804 ZNF415Q09FC8 603 aa10.47□□□□□ -0.73
CCDC78-211ENST00000481804 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
CCDC78-211ENST00000481804 NOTCH2Q04721 2471 aa10.47□□□□□ -0.73
CCDC78-211ENST00000481804 LINC01587Q99440 93 aa10.47□□□□□ -0.73
CCDC78-211ENST00000481804 Q6ZSN1 163 aa10.46□□□□□ -0.73
CCDC78-211ENST00000481804 ABCA12Q86UK0 2595 aa10.46□□□□□ -0.73
CCDC78-211ENST00000481804 Q6Q795 121 aa10.46□□□□□ -0.73
CCDC78-211ENST00000481804 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
CCDC78-211ENST00000481804 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.73
CCDC78-211ENST00000481804 PTPN13Q12923 2485 aa10.46□□□□□ -0.74
CCDC78-211ENST00000481804 B4DSR2 109 aa10.46□□□□□ -0.74
CCDC78-211ENST00000481804 Q9H8V8 135 aa10.46□□□□□ -0.74
CCDC78-211ENST00000481804 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms