RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 Q8N976 141 aa4.48□□□□□ -1.69
PRDM1-206ENST00000481163 NUP35Q8NFH5 326 aa4.48□□□□□ -1.69
PRDM1-206ENST00000481163 BAALCQ8WXS3 180 aa4.48□□□□□ -1.69
PRDM1-206ENST00000481163 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
PRDM1-206ENST00000481163 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.47□□□□□ -1.69
PRDM1-206ENST00000481163 TRAV8-3A0A0A6YYJ7 113 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 IGKV3OR2-268A0A0C4DH90 116 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 SMKR1H3BMG3 65 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 UBE2L6O14933 153 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 NDUFS6O75380 124 aaKnown RBP4.47□□□□□ -1.69
PRDM1-206ENST00000481163 GAS8-AS1O95177 125 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 NCR2O95944 276 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 CRPP02741 224 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 BTF3P20290 206 aaKnown RBP4.47□□□□□ -1.69
PRDM1-206ENST00000481163 PMCHP20382 165 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 AMTP48728 403 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 IFITM2Q01629 132 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 RIGQ13278 110 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 COTL1Q14019 142 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 ELOBQ15370 118 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 TMEM97Q5BJF2 176 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 CT83Q5H943 113 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 MRPL54Q6P161 138 aaKnown RBP4.47□□□□□ -1.69
PRDM1-206ENST00000481163 AMN1Q8IY45 258 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 TM2D2Q9BX73 214 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 MRPL18Q9H0U6 180 aaKnown RBP4.47□□□□□ -1.69
PRDM1-206ENST00000481163 SMDT1Q9H4I9 107 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 NAT8BQ9UHF3 227 aa4.47□□□□□ -1.69
PRDM1-206ENST00000481163 IGLV10-54A0A075B6I4 117 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 RAB4AP20338 218 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 LAGE3Q14657 143 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 ENHOQ6UWT2 76 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 LINC00269Q8N2A0 174 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 RMI2Q96E14 147 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 TMEM243Q9BU79 118 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 CNFNQ9BYD5 112 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 GFRA4Q9GZZ7 299 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 ST20Q9HBF5 79 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
PRDM1-206ENST00000481163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.45□□□□□ -1.7
PRDM1-206ENST00000481163 IGLV5-52A0A0A0MRZ9 124 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 SMIM27A0A1W2PRY6 76 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 IGKV2-29A2NJV5 120 aaPredicted RBP4.45□□□□□ -1.7
PRDM1-206ENST00000481163 LRCOL1A6NCL2 159 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 FAM231BA6NCW3 169 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 SDHAF1A6NFY7 115 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 HLA-DQA1P01909 254 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 RBX1P62877 108 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 WFDC2Q14508 124 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 CLLU1Q5K131 121 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 AMMECR1LQ6DCA0 310 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 RNASEKQ6P5S7 137 aaKnown RBP4.45□□□□□ -1.7
PRDM1-206ENST00000481163 MAPKAPK5-AS1Q8N8E1 139 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 RNF185Q96GF1 192 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 C1orf43Q9BWL3 253 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 TMEM191AQ9H0A3 160 aa4.45□□□□□ -1.7
PRDM1-206ENST00000481163 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 IGLV4-60A0A075B6I1 120 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 F8W036 122 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 I3L3M4 83 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 APCSP02743 223 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 RPS10P46783 165 aaKnown RBP4.44□□□□□ -1.7
PRDM1-206ENST00000481163 PKIAP61925 76 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 HAMPP81172 84 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 Q0VG73 95 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 IQCJQ1A5X6 159 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 MRPL51Q4U2R6 128 aaKnown RBP4.44□□□□□ -1.7
PRDM1-206ENST00000481163 CDPF1Q6NVV7 123 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 Q8N814 137 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 CHCHD7Q9BUK0 85 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 TMEM242Q9NWH2 141 aa4.44□□□□□ -1.7
PRDM1-206ENST00000481163 MT-ND4LP03901 98 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 GCSHP23434 173 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 FCER1GP30273 86 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 CKS2P33552 79 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 REG3AQ06141 175 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 COMMD7Q86VX2 200 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 C20orf203Q8NBC4 194 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 FRZBQ92765 325 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 MRAP2Q96G30 205 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 COX11Q9Y6N1 276 aa4.43□□□□□ -1.7
PRDM1-206ENST00000481163 PPP1R2P9O14990 202 aa4.42□□□□□ -1.7
PRDM1-206ENST00000481163 HBBP68871 147 aa4.42□□□□□ -1.7
PRDM1-206ENST00000481163 MIAQ16674 131 aa4.42□□□□□ -1.7
PRDM1-206ENST00000481163 FAM104BQ5XKR9 115 aa4.42□□□□□ -1.7
PRDM1-206ENST00000481163 TMEM70Q9BUB7 260 aa4.42□□□□□ -1.7
PRDM1-206ENST00000481163 TRBV6-5A0A0K0K1A5 114 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 LOC389332A0A1B0GUA5 103 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 A0A1B0GW15 77 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 TMEM218A2RU14 115 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 D6R8Y8 96 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 USP17L23D6RBM5 183 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 VCYO14598 125 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 TSHBP01222 138 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 SMR3BP02814 79 aaPredicted RBP4.41□□□□□ -1.7
PRDM1-206ENST00000481163 S100A8P05109 93 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 FGF6P10767 208 aa4.41□□□□□ -1.7
PRDM1-206ENST00000481163 PNRC1Q12796 327 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms