RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ZNF56Q15929 161 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 MPV17L2Q567V2 206 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 SPANXN1Q5VSR9 72 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 BAGE2Q86Y30 109 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 C15orf54Q8N8G6 183 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 DNAJC30Q96LL9 226 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 CYTL1Q9NRR1 136 aa4.16□□□□□ -1.74
LRCH3-216ENST00000481048 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 USP17L23D6RBM5 183 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 H7C1H1 209 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 PFDN1O60925 122 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 P01737 135 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 SMIM17P0DL12 118 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 RPL37AP61513 92 aaKnown RBP4.15□□□□□ -1.75
LRCH3-216ENST00000481048 ZNF345Q14585 488 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 IQCJQ1A5X6 159 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 TMUB2Q71RG4 321 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 OR10AG1Q8NH19 301 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 CHCHD5Q9BSY4 110 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 DERL1Q9BUN8 251 aa4.15□□□□□ -1.75
LRCH3-216ENST00000481048 A0A0D9SG52 128 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 ARPC5O15511 151 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 PRSS1P07477 247 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 RPS20P60866 119 aaKnown RBP4.14□□□□□ -1.75
LRCH3-216ENST00000481048 RBX1P62877 108 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 EIF5AP63241 154 aaKnown RBP4.14□□□□□ -1.75
LRCH3-216ENST00000481048 CIRBPQ14011 172 aaKnown RBP4.14□□□□□ -1.75
LRCH3-216ENST00000481048 SDIM1Q6ZPB5 146 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 Q6ZRU5 148 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 NTM-AS1Q6ZSK4 140 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 SFT2D1Q8WV19 159 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 SMIM12Q96EX1 92 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 AP1S3Q96PC3 154 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 KIF25-AS1Q9Y6Z4 181 aa4.14□□□□□ -1.75
LRCH3-216ENST00000481048 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
LRCH3-216ENST00000481048 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.13□□□□□ -1.75
LRCH3-216ENST00000481048 IGHV1-24A0A0C4DH33 117 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 XKRY2A2RUG3 117 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 F2Z2F3 143 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 G3V3Q6 166 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 HLA-DQA1P01909 254 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 CNBPP62633 177 aaKnown RBP4.13□□□□□ -1.75
LRCH3-216ENST00000481048 CACNG7P62955 275 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 REG3AQ06141 175 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 KRTAP26-1Q6PEX3 210 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 LINC00269Q8N2A0 174 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 KCNRGQ8N5I3 272 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 RNF185Q96GF1 192 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 BIN3Q9NQY0 253 aa4.13□□□□□ -1.75
LRCH3-216ENST00000481048 TRAV1-1A0A0B4J248 108 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 M0QY20 66 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 WDR73Q6P4I2 378 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 FAM213BQ8TBF2 198 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 C11orf52Q96A22 123 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 PGLYRP4Q96LB8 373 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 MANBALQ9NQG1 85 aa4.12□□□□□ -1.75
LRCH3-216ENST00000481048 IGHV3-64A0A075B6Q5 118 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 MUC21A0A0G2JKD1 596 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 MUC21A0A140T8X8 626 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 C19orf71A6NCJ1 209 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 TEX46H3BTG2 121 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 TRGC1P0CF51 173 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 IGLC6P0CF74 106 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 RPL35P42766 123 aaKnown RBP4.11□□□□□ -1.75
LRCH3-216ENST00000481048 RAB5CP51148 216 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 CCL20P78556 96 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 GAGE6Q13070 117 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 RGS21Q2M5E4 152 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 CFAP161Q6P656 301 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 FER1L6-AS1Q8NA97 138 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 C20orf203Q8NBC4 194 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 TMEM243Q9BU79 118 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 NIT2Q9NQR4 276 aa4.11□□□□□ -1.75
LRCH3-216ENST00000481048 hDV102S1A0JD36 115 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 PDE6DO43924 150 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 SSTP61278 116 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 COTL1Q14019 142 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 EIF5AL1Q6IS14 154 aaKnown RBP4.1□□□□□ -1.75
LRCH3-216ENST00000481048 C9orf62Q8N4C0 152 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 OR2D3Q8NGH3 330 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 DPH3Q96FX2 82 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 FAM210AQ96ND0 272 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 DPH3P1Q9H4G8 78 aa4.1□□□□□ -1.75
LRCH3-216ENST00000481048 IGLV4-60A0A075B6I1 120 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 A0A1B0GV50 99 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 H7C423 109 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 UBE2L6O14933 153 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 BCL2L11O43521 198 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 NCR2O95944 276 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 IFNA1P01562 189 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 MGPP08493 103 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 NTF3P20783 257 aa4.09□□□□□ -1.75
LRCH3-216ENST00000481048 TAGLN2P37802 199 aaKnown RBP4.09□□□□□ -1.75
LRCH3-216ENST00000481048 GNG4P50150 75 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms