RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 GAGE13Q4V321 117 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 OR10J3Q5JRS4 329 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 WFDC10BQ8IUB3 73 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 ORMDL3Q8N138 153 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 NRACQ8N912 160 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 CLRN3Q8NCR9 226 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 KIR2DL4Q99706 377 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 TMEM70Q9BUB7 260 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 TIMM21Q9BVV7 248 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 TM2D2Q9BX73 214 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 GNB1LQ9BYB4 327 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 KRTAP1-5Q9BYS1 174 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 ST20Q9HBF5 79 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 URGCP-MRPS24S4R325 110 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 DNAH2Q9P225 4427 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 A0A087WX48 190 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 C7orf77A4D0Y5 90 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 MGPP08493 103 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 MRPL51Q4U2R6 128 aaKnown RBP3.43□□□□□ -1.86
HDAC6-223ENST00000480525 NTM-AS1Q6ZSK4 140 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 AMN1Q8IY45 258 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 NTN5Q8WTR8 489 aaPredicted RBP3.43□□□□□ -1.86
HDAC6-223ENST00000480525 TMEM18Q96B42 140 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 Q9UF83 564 aa3.43□□□□□ -1.86
HDAC6-223ENST00000480525 PKHD1P08F94 4074 aa3.42□□□□□ -1.86
HDAC6-223ENST00000480525 MUC21A0A0G2JKD1 596 aa3.42□□□□□ -1.86
HDAC6-223ENST00000480525 MUC21A0A140T8X8 626 aa3.42□□□□□ -1.86
HDAC6-223ENST00000480525 APCSP02743 223 aa3.42□□□□□ -1.86
HDAC6-223ENST00000480525 CKS2P33552 79 aa3.42□□□□□ -1.86
HDAC6-223ENST00000480525 SMIM2Q9BVW6 85 aa3.42□□□□□ -1.86
HDAC6-223ENST00000480525 PYGO1Q9Y3Y4 419 aa3.42□□□□□ -1.86
HDAC6-223ENST00000480525 IGLV2-18A0A075B6J9 118 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 TNFRSF6BO95407 300 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 TSHBP01222 138 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 PMCHP20382 165 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 AMTP48728 403 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 CAMPP49913 170 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
HDAC6-223ENST00000480525 C14orf177Q52M58 125 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 MRPL54Q6P161 138 aaKnown RBP3.41□□□□□ -1.86
HDAC6-223ENST00000480525 TMEM136Q6ZRR5 245 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 C20orf203Q8NBC4 194 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 NXT2Q9NPJ8 142 aaKnown RBP3.41□□□□□ -1.86
HDAC6-223ENST00000480525 SPANXA1Q9NS26 97 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 PGPEP1Q9NXJ5 209 aa3.41□□□□□ -1.86
HDAC6-223ENST00000480525 TRAV26-2A0A0B4J265 109 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 LRCOL1A6NCL2 159 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 PRSS29PA6NIE9 313 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 D6R8Y8 96 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 UBE2L6O14933 153 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 EREGO14944 169 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 APOC3P02656 99 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 CRPP02741 224 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 RPS10P46783 165 aaKnown RBP3.4□□□□□ -1.87
HDAC6-223ENST00000480525 RBX1P62877 108 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 ORMDL2Q53FV1 153 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 PAPPA-AS1Q5QFB9 102 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 Q8N8P6 123 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 RPL39LQ96EH5 51 aaKnown RBP3.4□□□□□ -1.87
HDAC6-223ENST00000480525 PRELID3AQ96N28 172 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 YPEL4Q96NS1 127 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 CHCHD5Q9BSY4 110 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 MAP1LC3AQ9H492 121 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 PKD1P98161 4303 aa3.4□□□□□ -1.87
HDAC6-223ENST00000480525 F8WDY8 70 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 NPYP01303 97 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 FGF6P10767 208 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 REG3AQ06141 175 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 DGAT2L7PQ6IED9 249 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 ENHOQ6UWT2 76 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 FAM19A3Q7Z5A8 133 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 Q8N976 141 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 C1orf43Q9BWL3 253 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 RPS10P5Q9NQ39 176 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 SMCO4Q9NRQ5 59 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 CDC42SE2Q9NRR3 84 aa3.39□□□□□ -1.87
HDAC6-223ENST00000480525 EPPK1P58107 5090 aaKnown RBP3.39□□□□□ -1.87
HDAC6-223ENST00000480525 A0A087WTM6 91 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 C1orf196B1AJZ1 125 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 GAS8-AS1O95177 125 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 ANGP03950 147 aaKnown RBP3.38□□□□□ -1.87
HDAC6-223ENST00000480525 RAB5AP20339 215 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 FCER1GP30273 86 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 SSTP61278 116 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 ODF1Q14990 250 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 KRTAP26-1Q6PEX3 210 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 LINC01561Q8N1V8 128 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 ZNF664Q8N3J9 261 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 TIMM17AQ99595 171 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 ALKBH7Q9BT30 221 aaPredicted RBP3.38□□□□□ -1.87
HDAC6-223ENST00000480525 KLK12Q9UKR0 248 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
HDAC6-223ENST00000480525 UBE2D4Q9Y2X8 147 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms