RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CACNA1BQ00975 2339 aa7.78□□□□□ -1.16
SIK3-210ENST00000480468 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
SIK3-210ENST00000480468 TRBV12-3P01733 135 aa7.78□□□□□ -1.16
SIK3-210ENST00000480468 USMG5Q96IX5 58 aa7.78□□□□□ -1.16
SIK3-210ENST00000480468 UBE2D4Q9Y2X8 147 aa7.78□□□□□ -1.16
SIK3-210ENST00000480468 MAP1BP46821 2468 aaKnown RBP7.78□□□□□ -1.16
SIK3-210ENST00000480468 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
SIK3-210ENST00000480468 H3BUA1 57 aa7.77□□□□□ -1.17
SIK3-210ENST00000480468 OVOL2Q9BRP0 275 aa7.77□□□□□ -1.17
SIK3-210ENST00000480468 LY6HO94772 140 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 PF4V1P10720 104 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 MALP21145 153 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 Q8N2B8 174 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 IGHG2P01859 326 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 ZFP36P26651 326 aaKnown RBP7.76□□□□□ -1.17
SIK3-210ENST00000480468 SAA4P35542 130 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 MOB4Q9Y3A3 225 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 APC2O95996 2303 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 ADGRG4Q8IZF6 3080 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 BOD1L1Q8NFC6 3051 aa7.76□□□□□ -1.17
SIK3-210ENST00000480468 PF4P02776 101 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 PRIMA1Q86XR5 153 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 CDKN2A-AS1Q9UH64 79 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 DNAL4O96015 105 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 RNASE13Q5GAN3 156 aaKnown RBP7.75□□□□□ -1.17
SIK3-210ENST00000480468 RNF152Q8N8N0 203 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 FAM218AQ96MZ4 157 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 SPTBN2O15020 2390 aa7.75□□□□□ -1.17
SIK3-210ENST00000480468 CACNA1HO95180 2353 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 K7EMT4 169 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 SOSTDC1Q6X4U4 206 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 OBSCN-AS1Q96MR7 158 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 Q9H8V8 135 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 IGKV3-7A0A075B6H7 116 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 NDUFC2-KCTD14E9PQ53 114 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 OXTP01178 125 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 RPL28P46779 137 aaKnown RBP7.74□□□□□ -1.17
SIK3-210ENST00000480468 HIST2H2BCQ6DN03 193 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 HIST2H2BDQ6DRA6 164 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 MRAPQ8TCY5 172 aa7.74□□□□□ -1.17
SIK3-210ENST00000480468 ANKHD1Q8IWZ3 2542 aaKnown RBP7.73□□□□□ -1.17
SIK3-210ENST00000480468 TRAV13-1A0A0B4J241 112 aa7.73□□□□□ -1.17
SIK3-210ENST00000480468 KLRB1Q12918 225 aa7.73□□□□□ -1.17
SIK3-210ENST00000480468 Q5XG85 94 aa7.73□□□□□ -1.17
SIK3-210ENST00000480468 LINC01560Q8TB33 94 aa7.73□□□□□ -1.17
SIK3-210ENST00000480468 PRO3102Q9H379 93 aa7.73□□□□□ -1.17
SIK3-210ENST00000480468 F5H768 121 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 PIK3CD-AS1Q5SR53 167 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 C11orf71Q6IPW1 123 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 FAM19A3Q7Z5A8 133 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 NACAE9PAV3 2078 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 TRAV13-2A0A0B4J235 113 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 USP17L23D6RBM5 183 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 FBXL19-AS1Q494R0 122 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
SIK3-210ENST00000480468 K7ENP7 123 aa7.71□□□□□ -1.17
SIK3-210ENST00000480468 TRIOBPQ9H2D6 2365 aa7.71□□□□□ -1.17
SIK3-210ENST00000480468 CSMD1Q96PZ7 3565 aa7.71□□□□□ -1.18
SIK3-210ENST00000480468 TRAV12-2A0A075B6T6 113 aa7.71□□□□□ -1.18
SIK3-210ENST00000480468 SYNJ2BPP57105 145 aa7.71□□□□□ -1.18
SIK3-210ENST00000480468 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.18
SIK3-210ENST00000480468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.71□□□□□ -1.18
SIK3-210ENST00000480468 DEFB124Q8NES8 71 aa7.71□□□□□ -1.18
SIK3-210ENST00000480468 ZNF625Q96I27 306 aaPredicted RBP7.71□□□□□ -1.18
SIK3-210ENST00000480468 LINC00467Q9BRT7 94 aa7.71□□□□□ -1.18
SIK3-210ENST00000480468 ASPMQ8IZT6 3477 aa7.7□□□□□ -1.18
SIK3-210ENST00000480468 NDUFC2O95298 119 aa7.7□□□□□ -1.18
SIK3-210ENST00000480468 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
SIK3-210ENST00000480468 MED13LQ71F56 2210 aa7.7□□□□□ -1.18
SIK3-210ENST00000480468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.7□□□□□ -1.18
SIK3-210ENST00000480468 IGKV2-29A2NJV5 120 aaPredicted RBP7.7□□□□□ -1.18
SIK3-210ENST00000480468 IGHV3-11P01762 117 aa7.7□□□□□ -1.18
SIK3-210ENST00000480468 Q8NA96 180 aa7.7□□□□□ -1.18
SIK3-210ENST00000480468 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
SIK3-210ENST00000480468 IGKV3D-7A0A0C4DH55 119 aa7.69□□□□□ -1.18
SIK3-210ENST00000480468 SNRPD3P62318 126 aaKnown RBP7.69□□□□□ -1.18
SIK3-210ENST00000480468 Q9HAA7 133 aa7.69□□□□□ -1.18
SIK3-210ENST00000480468 SMIM1B2RUZ4 78 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 H0YGX0 51 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 LINC00242Q5T6M2 205 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 IGHV3OR16-12A0A075B7B8 117 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 CRPP02741 224 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 COX6A2Q02221 97 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 SPINK13Q1W4C9 94 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 HRCT1Q6UXD1 115 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 DCHS2Q6V1P9 2916 aa7.68□□□□□ -1.18
SIK3-210ENST00000480468 PROK1P58294 105 aa7.67□□□□□ -1.18
SIK3-210ENST00000480468 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
SIK3-210ENST00000480468 PIMREGQ9BSJ6 248 aa7.67□□□□□ -1.18
SIK3-210ENST00000480468 C14orf132Q9NPU4 83 aa7.67□□□□□ -1.18
SIK3-210ENST00000480468 A0A087WVE0 104 aa7.67□□□□□ -1.18
SIK3-210ENST00000480468 K7EQG2 157 aa7.67□□□□□ -1.18
SIK3-210ENST00000480468 S100A7L2Q5SY68 101 aa7.67□□□□□ -1.18
SIK3-210ENST00000480468 IGHV3-73A0A0B4J1V6 119 aa7.66□□□□□ -1.18
SIK3-210ENST00000480468 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
SIK3-210ENST00000480468 EPM2AB3EWF7 344 aa7.66□□□□□ -1.18
SIK3-210ENST00000480468 IGKV3-20P01619 116 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms