RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SPG11Q96JI7 2443 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 IGKV1-17P01599 117 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 REG3AQ06141 175 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 FHL2Q14192 279 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 ESRGQ1W209 222 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 BRD3OSQ6XYD6 125 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 CRIPAKQ8N1N5 446 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 NHLRC4P0CG21 123 aaPredicted RBP4.19□□□□□ -1.74
USF3-202ENST00000478658 ZFAND2AQ8N6M9 145 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 SMIM10L1P0DMW3 83 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 ZNF491Q8N8L2 437 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 SMIM10Q96HG1 83 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 X6R8D5 127 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 ZNF837Q96EG3 531 aaPredicted RBP4.18□□□□□ -1.74
USF3-202ENST00000478658 HCSTQ9UBK5 93 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 SYCNQ0VAF6 134 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 RITA1Q96K30 269 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 IGLV3-9A0A075B6K5 115 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.18□□□□□ -1.74
USF3-202ENST00000478658 IGHV3-38A0A0C4DH36 116 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 IGKV2-29A2NJV5 120 aaPredicted RBP4.18□□□□□ -1.74
USF3-202ENST00000478658 A0A1B0GU69 56 aa4.18□□□□□ -1.74
USF3-202ENST00000478658 PRB2P02812 416 aaPredicted RBP4.18□□□□□ -1.74
USF3-202ENST00000478658 A0A0G2JRQ6 117 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 TRBV6-1A0A0K0K1D8 114 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 SMKR1H3BMG3 65 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 ZNF726P1Q15940 193 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 PRSS57Q6UWY2 283 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 ROS1P08922 2347 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 DEFB131BA0A096LNP1 70 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 LY6LH3BQJ8 138 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 CCDC179H3BU77 68 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 LINC01554Q52M75 96 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 CAMK2N1Q7Z7J9 78 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 NPBQ8NG41 125 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 MIR7-3HGQ8N6C7 128 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 Q6ZS92 163 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 ALPK3Q96L96 1907 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 MDFIQ99750 246 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 IGKV1D-17A0A075B6S4 117 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 LINC00473A8K010 186 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 IGLC6P0CF74 106 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 CSNK1G2-AS1Q8NCQ2 148 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 GPR179Q6PRD1 2367 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 TNS1Q9HBL0 1735 aaKnown RBP4.17□□□□□ -1.74
USF3-202ENST00000478658 PATE3B3GLJ2 98 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 IGHV2-5P01817 119 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 MRGPRG-AS1Q2M3A8 158 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
USF3-202ENST00000478658 LY6G6EA0A0G2JKS1 128 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 SPRR3Q9UBC9 169 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 PRSS33Q8NF86 280 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 COL5A1P20908 1838 aaPredicted RBP4.16□□□□□ -1.74
USF3-202ENST00000478658 IGKV2-24A0A0C4DH68 120 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 TRBV6-5A0A0K0K1A5 114 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 IGHV4-38-2P0DP08 117 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 A0A096LPF7 62 aa4.16□□□□□ -1.74
USF3-202ENST00000478658 IGLC1P0CG04 106 aa4.15□□□□□ -1.74
USF3-202ENST00000478658 LINC01590Q5TEZ4 76 aa4.15□□□□□ -1.74
USF3-202ENST00000478658 IGKV1-12A0A0C4DH73 117 aa4.15□□□□□ -1.74
USF3-202ENST00000478658 WISP3O95389 354 aaPredicted RBP4.15□□□□□ -1.74
USF3-202ENST00000478658 CPAMD8Q8IZJ3 1885 aa4.15□□□□□ -1.74
USF3-202ENST00000478658 CD24P25063 80 aa4.15□□□□□ -1.74
USF3-202ENST00000478658 SPINK6Q6UWN8 80 aa4.15□□□□□ -1.74
USF3-202ENST00000478658 HIVEP2P31629 2446 aa4.15□□□□□ -1.75
USF3-202ENST00000478658 COX7CP15954 63 aa4.15□□□□□ -1.75
USF3-202ENST00000478658 SCXQ7RTU7 201 aa4.15□□□□□ -1.75
USF3-202ENST00000478658 ABCA2Q9BZC7 2435 aa4.15□□□□□ -1.75
USF3-202ENST00000478658 FAM229AH3BQW9 127 aa4.15□□□□□ -1.75
USF3-202ENST00000478658 Q0VFX4 171 aa4.15□□□□□ -1.75
USF3-202ENST00000478658 ENHOQ6UWT2 76 aa4.15□□□□□ -1.75
USF3-202ENST00000478658 IGLV5-52A0A0A0MRZ9 124 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 ERC2-IT1O76042 136 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 Q8N2B8 174 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 OTOGLQ3ZCN5 2332 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 TRBV7-7A0A0K0K1E9 115 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 COL8A2P25067 703 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 CD164L2Q6UWJ8 174 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 CLUHP3Q96NS8 147 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 IGKV1D-43A0A0B4J1Z2 117 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 LELP1Q5T871 98 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 Q6Q795 121 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 Q6ZSR3 168 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 C1orf158Q8N1D5 194 aa4.14□□□□□ -1.75
USF3-202ENST00000478658 CHCHD10Q8WYQ3 142 aaPredicted RBP4.14□□□□□ -1.75
USF3-202ENST00000478658 HCG22E2RYF7 251 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 PIN1P1O15428 100 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 MBD6Q96DN6 1003 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 TRBV6-4A0A1B0GX49 114 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 COL9A2Q14055 689 aaPredicted RBP4.13□□□□□ -1.75
USF3-202ENST00000478658 TRAV22A0A0B4J277 110 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 LINC00114Q6XXX2 140 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 M0QXV9 152 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 NUPR1O60356 82 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 LHFPL1Q86WI0 220 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 E7EQL1 145 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 DEFB135Q30KP9 77 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms