RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 TPM3P06753 285 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 CEBPGP53567 150 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 CRYBA4P53673 196 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 CCL18P55774 89 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 BASP1P80723 227 aaKnown RBP-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 TMED2Q15363 201 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 CBLN4Q9NTU7 201 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 SBF2Q86WG5 1849 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 MED23Q9ULK4 1368 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 PAPPA2Q9BXP8 1791 aa-1.62□□□□□ -2.67
NCKAP1-204ENST00000477988 A2MP01023 1474 aa-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 H3BMG7 143 aa-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 CCDC179H3BU77 68 aa-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 M0QX08 132 aa-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 UQCRQO14949 82 aa-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 SLC25A5P05141 298 aaKnown RBP-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 S100A11P31949 105 aa-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 LSM3P62310 102 aaKnown RBP-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 MT1HP80294 61 aa-1.63□□□□□ -2.67
NCKAP1-204ENST00000477988 KIF21AQ7Z4S6 1674 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 TROQ12816 1431 aaPredicted RBP-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 CFAP46Q8IYW2 2715 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 HMGXB3Q12766 1538 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 M0QZK8 103 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 PITX3O75364 302 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 NCR2O95944 276 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 COTL1Q14019 142 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 KRTAP20-1Q3LI63 56 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 C9orf116Q5BN46 136 aaPredicted RBP-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 SNX29P2Q8IUI4 249 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 C10orf82Q8WW14 230 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 UFC1Q9Y3C8 167 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 FMN2Q9NZ56 1722 aa-1.64□□□□□ -2.67
NCKAP1-204ENST00000477988 SLIT1O75093 1534 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 ARHGEF12Q9NZN5 1544 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 NWD2Q9ULI1 1742 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 CEP290O15078 2479 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 MYH8P13535 1937 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 FAM25EA8MYX2 175 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 MT1HL1P0DM35 61 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 TPM4P67936 248 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 DHRS4L2Q6PKH6 230 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 HRCT1Q6UXD1 115 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 ATP6V0E2Q8NHE4 81 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 MAFIPQ8WZ33 124 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 CHD7Q9P2D1 2997 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 FAM186AA6NE01 2351 aa-1.65□□□□□ -2.67
NCKAP1-204ENST00000477988 YTHDC2Q9H6S0 1430 aaKnown RBP-1.66□□□□□ -2.67
NCKAP1-204ENST00000477988 RANBP2P49792 3224 aaKnown RBP-1.66□□□□□ -2.67
NCKAP1-204ENST00000477988 TCRAP04437 139 aa-1.66□□□□□ -2.68
NCKAP1-204ENST00000477988 RPL22P35268 128 aaKnown RBP-1.66□□□□□ -2.68
NCKAP1-204ENST00000477988 SPA17Q15506 151 aa-1.66□□□□□ -2.68
NCKAP1-204ENST00000477988 C9orf62Q8N4C0 152 aa-1.66□□□□□ -2.68
NCKAP1-204ENST00000477988 ARL2BPQ9Y2Y0 163 aa-1.66□□□□□ -2.68
NCKAP1-204ENST00000477988 NOP16Q9Y3C1 178 aaKnown RBP-1.66□□□□□ -2.68
NCKAP1-204ENST00000477988 MED31Q9Y3C7 131 aa-1.66□□□□□ -2.68
NCKAP1-204ENST00000477988 ADCY9O60503 1353 aa-1.67□□□□□ -2.68
NCKAP1-204ENST00000477988 FAM92AA1XBS5 289 aa-1.67□□□□□ -2.68
NCKAP1-204ENST00000477988 HIST1H1BP16401 226 aaKnown RBP-1.67□□□□□ -2.68
NCKAP1-204ENST00000477988 Q6JHZ5 121 aa-1.67□□□□□ -2.68
NCKAP1-204ENST00000477988 OR13C6PQ8NH95 151 aa-1.67□□□□□ -2.68
NCKAP1-204ENST00000477988 PHB2Q99623 299 aa-1.67□□□□□ -2.68
NCKAP1-204ENST00000477988 CSMD1Q96PZ7 3565 aa-1.67□□□□□ -2.68
NCKAP1-204ENST00000477988 SYNMO15061 1565 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 ERCC6Q03468 1493 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 J3QLW9 94 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 IFNA1P01562 189 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 CTXN2P0C2S0 81 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 PIRTP0C851 137 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 SMIM6P0DI80 62 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 CDKN2CP42773 168 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 GNG3P63215 75 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 NDUFA12Q9UI09 145 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 LAMTOR2Q9Y2Q5 125 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 DNAJC15Q9Y5T4 150 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 MYOM3Q5VTT5 1437 aa-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 RIMS1Q86UR5 1692 aaKnown RBP-1.68□□□□□ -2.68
NCKAP1-204ENST00000477988 RGS21Q2M5E4 152 aa-1.69□□□□□ -2.68
NCKAP1-204ENST00000477988 LINC01545Q5VT33 79 aa-1.69□□□□□ -2.68
NCKAP1-204ENST00000477988 PTRHD1Q6GMV3 140 aaKnown RBP-1.69□□□□□ -2.68
NCKAP1-204ENST00000477988 TMED4Q7Z7H5 227 aa-1.69□□□□□ -2.68
NCKAP1-204ENST00000477988 SMIM20Q8N5G0 67 aa-1.69□□□□□ -2.68
NCKAP1-204ENST00000477988 SMIM4Q8WVI0 70 aa-1.69□□□□□ -2.68
NCKAP1-204ENST00000477988 AMELXQ99217 191 aa-1.69□□□□□ -2.68
NCKAP1-204ENST00000477988 M0R135 149 aa-1.7□□□□□ -2.68
NCKAP1-204ENST00000477988 POLR2HP52434 150 aaKnown RBP-1.7□□□□□ -2.68
NCKAP1-204ENST00000477988 ATP11AUNQ6ZP68 121 aa-1.7□□□□□ -2.68
NCKAP1-204ENST00000477988 NAA60Q9H7X0 242 aa-1.7□□□□□ -2.68
NCKAP1-204ENST00000477988 MARF1Q9Y4F3 1742 aaKnown RBP-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 DAPK1P53355 1430 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 IFNGP01579 166 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 PSPHP78330 225 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 COX17Q14061 63 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 ZNF818PQ6ZRF7 136 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 FAM24BQ8N5W8 94 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 THEM6Q8WUY1 208 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 DYDC1Q8WWB3 177 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 PPP1R14BQ96C90 147 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 TRAPPC2LQ9UL33 140 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 APLNQ9ULZ1 77 aa-1.71□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms