RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MGAM2Q2M2H8 2515 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 C19orf71A6NCJ1 209 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 H3BVH4 76 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 GNRH2O43555 120 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 ZNF324O75467 553 aaPredicted RBP2.44□□□□□ -2.02
UBR3-209ENST00000477461 TYMSP04818 313 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 RBMY1A1P0DJD3 496 aaKnown RBP2.44□□□□□ -2.02
UBR3-209ENST00000477461 RBMY1CP0DJD4 496 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 S100PP25815 95 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 EMP1P54849 157 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 RHEBQ15382 184 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 RBMY1FQ15415 496 aaKnown RBP2.44□□□□□ -2.02
UBR3-209ENST00000477461 TDRG1Q3Y452 100 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 C10orf91Q5T1B1 145 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 SPANXN1Q5VSR9 72 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 KCNIP4Q6PIL6 250 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 ZNF705AQ6ZN79 300 aaPredicted RBP2.44□□□□□ -2.02
UBR3-209ENST00000477461 Q6ZQT7 251 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 SMIM15Q7Z3B0 74 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 SBSPONQ8IVN8 264 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 FER1L6-AS1Q8NA97 138 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 TSKUQ8WUA8 353 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 B9D2Q9BPU9 175 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 RETNQ9HD89 108 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 IL36BQ9NZH7 164 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 NAT8BQ9UHF3 227 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 PHLDA3Q9Y5J5 127 aa2.44□□□□□ -2.02
UBR3-209ENST00000477461 CUBNO60494 3623 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 ZFHX3Q15911 3703 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 A0A087WWC5 75 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 TRGV1A0A0A0MS02 117 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 C7orf77A4D0Y5 90 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 HIGD1CA8MV81 97 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 F2Z2F3 143 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 M0R2P5 195 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 M0R381 172 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 DEFB4AO15263 64 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 S100A8P05109 93 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 CXCL1P09341 107 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 OR5AL1P0C617 328 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 ARMS2P0C7Q2 107 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 TRGC1P0CF51 173 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 SPART-AS1P0CW21 52 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 SMIM17P0DL12 118 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 GZMBP10144 247 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 TCL1AP56279 114 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 DAD1P61803 113 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 CACNG7P62955 275 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 DNLZQ5SXM8 178 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 LYZL1Q6UWQ5 148 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 ZFP82Q8N141 532 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 BTF3L4Q96K17 158 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 TM2D3Q9BRN9 247 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 NOP10Q9NPE3 64 aaKnown RBP2.43□□□□□ -2.02
UBR3-209ENST00000477461 V9GYV3 84 aa2.43□□□□□ -2.02
UBR3-209ENST00000477461 TRGV2A0A075B6R0 118 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 TRAV9-1A0A075B6T8 112 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 MUC21A0A0G2JKD1 596 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 MUC21A0A140T8X8 626 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 A0A1B0GUT8 65 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 A0A1B0GW15 77 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 SMIM27A0A1W2PRY6 76 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 LYRM9A8MSI8 78 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 A8MWV9 139 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 SNAI2O43623 268 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 SPINK4O60575 86 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 PRM2P04554 102 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 IGLC6P0CF74 106 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 DEFB130BP0DP73 79 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 DEFB130AP0DP74 79 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 RNASE3P12724 160 aaKnown RBP2.42□□□□□ -2.02
UBR3-209ENST00000477461 NTF3P20783 257 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 LINC00315P59091 139 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 RAB4BP61018 213 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 LGALS9BQ3B8N2 356 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 FAM222AQ5U5X8 452 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 Q8NAQ8 132 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 C11orf72Q8NBR9 251 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 NUP35Q8NFH5 326 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 OR10AG1Q8NH19 301 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 AP1S3Q96PC3 154 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 IMMP2LQ96T52 175 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 C11orf68Q9H3H3 251 aaKnown RBP2.42□□□□□ -2.02
UBR3-209ENST00000477461 SMCO4Q9NRQ5 59 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 TMEM242Q9NWH2 141 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 MRPL16Q9NX20 251 aaKnown RBP2.42□□□□□ -2.02
UBR3-209ENST00000477461 URGCP-MRPS24S4R325 110 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 U3KQK5 164 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 NOTCH1P46531 2555 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 MUC4Q99102 2169 aa2.42□□□□□ -2.02
UBR3-209ENST00000477461 TRAV4A0A0B4J268 109 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 TRGV4A0A0C4DH28 118 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 ATP5G1P05496 136 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 MGPP08493 103 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 HTN3P15516 51 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 FOXA3P55318 350 aaPredicted RBP2.41□□□□□ -2.02
UBR3-209ENST00000477461 HBBP68871 147 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 ZNF56Q15929 161 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 COX19Q49B96 90 aa2.41□□□□□ -2.02
UBR3-209ENST00000477461 FAM74A4Q5TZK3 123 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms