RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ABCA12Q86UK0 2595 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 FBN2P35556 2912 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 H3BMM0 161 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 POM121L12Q8N7R1 296 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 UBE2WQ96B02 151 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 Q96MF0 132 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 CYSTM1Q9H1C7 97 aa6.24□□□□□ -1.41
VAPB-205ENST00000476395 HERVK_113P61574 105 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 H7C423 109 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 SLC50A1Q9BRV3 221 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 LINC00527Q9UJ94 153 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 J3QQQ9 107 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 KIF25-AS1Q9Y6Z4 181 aa6.23□□□□□ -1.41
VAPB-205ENST00000476395 RNASE3P12724 160 aaKnown RBP6.22□□□□□ -1.41
VAPB-205ENST00000476395 HELZ2Q9BYK8 2649 aaKnown RBP6.22□□□□□ -1.41
VAPB-205ENST00000476395 FASNP49327 2511 aaKnown RBP6.22□□□□□ -1.41
VAPB-205ENST00000476395 GNRH2O43555 120 aa6.22□□□□□ -1.41
VAPB-205ENST00000476395 Q6Q795 121 aa6.22□□□□□ -1.41
VAPB-205ENST00000476395 SMCR5Q8TEV8 140 aa6.22□□□□□ -1.41
VAPB-205ENST00000476395 MXRA5Q9NR99 2828 aa6.22□□□□□ -1.41
VAPB-205ENST00000476395 GNLYP22749 145 aa6.22□□□□□ -1.41
VAPB-205ENST00000476395 C2orf48Q96LS8 159 aa6.21□□□□□ -1.41
VAPB-205ENST00000476395 ZANQ9Y493 2812 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 H3BS24 57 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 ATXN8Q156A1 80 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 A0A087WWL8 130 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 TRBV7-1A0A0A6YYK4 115 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 TRAV41A0A0B4J266 112 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 TRBV10-2A0A0K0K1G8 114 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 IGIPA6NJ69 53 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 F6UB75 175 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 C19orf84I3L1E1 186 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 FAM19A1Q7Z5A9 133 aa6.21□□□□□ -1.42
VAPB-205ENST00000476395 BBC3Q96PG8 261 aaPredicted RBP6.21□□□□□ -1.42
VAPB-205ENST00000476395 PTPN13Q12923 2485 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 NXPH4O95158 308 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 PRSS2P07478 247 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
VAPB-205ENST00000476395 DAND5Q8N907 189 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 BPESC1Q9GZL8 116 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 IGKV3-7A0A075B6H7 116 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 PFN2P35080 140 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 RPL13AP40429 203 aaKnown RBP6.2□□□□□ -1.42
VAPB-205ENST00000476395 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
VAPB-205ENST00000476395 S100A4P26447 101 aaKnown RBP6.19□□□□□ -1.42
VAPB-205ENST00000476395 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
VAPB-205ENST00000476395 USP9YO00507 2555 aaPredicted RBP6.19□□□□□ -1.42
VAPB-205ENST00000476395 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
VAPB-205ENST00000476395 TRAV12-3A0A0B4J271 114 aa6.19□□□□□ -1.42
VAPB-205ENST00000476395 NDUFC2O95298 119 aa6.19□□□□□ -1.42
VAPB-205ENST00000476395 CD164Q04900 197 aa6.19□□□□□ -1.42
VAPB-205ENST00000476395 ZNF256Q9Y2P7 627 aaPredicted RBP6.19□□□□□ -1.42
VAPB-205ENST00000476395 VPREB1P12018 145 aa6.19□□□□□ -1.42
VAPB-205ENST00000476395 PHLDA3Q9Y5J5 127 aa6.19□□□□□ -1.42
VAPB-205ENST00000476395 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
VAPB-205ENST00000476395 SORL1Q92673 2214 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 IGHV3OR16-10A0A075B7F0 116 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 P0DMU3 169 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 METTL26Q96S19 204 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 NOTCH2Q04721 2471 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 CFHR3Q02985 330 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 NSUN5P1Q3KNT7 163 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 LENEPQ9Y5L5 61 aa6.18□□□□□ -1.42
VAPB-205ENST00000476395 PRRC2AP48634 2157 aaKnown RBP6.18□□□□□ -1.42
VAPB-205ENST00000476395 FAM104AQ969W3 186 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 C9orf85Q96MD7 179 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 ICOSQ9Y6W8 199 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 TMEM223A0PJW6 202 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 FAM74A4Q5TZK3 123 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 A0A0B4J2C4 111 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 KLLNB2CW77 178 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 M0R2P5 195 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 ZNF876PQ49A33 203 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 BRD3OSQ6XYD6 125 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 C9orf139Q6ZV77 190 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 WFDC11Q8NEX6 87 aa6.17□□□□□ -1.42
VAPB-205ENST00000476395 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 RNASE4P34096 147 aaKnown RBP6.16□□□□□ -1.42
VAPB-205ENST00000476395 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 CCDC168Q8NDH2 2452 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 HECTD1Q9ULT8 2610 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 F5H697 171 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 IGHV4-38-2P0DP08 117 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 POLR2KP53803 58 aaKnown RBP6.16□□□□□ -1.42
VAPB-205ENST00000476395 DOPEY2Q9Y3R5 2298 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 FAM223BA6NKX1 122 aa6.16□□□□□ -1.42
VAPB-205ENST00000476395 UQCRQO14949 82 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms