RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 PRR14LQ5THK1 2151 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 TEX49A0A1B0GTD5 131 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 REG3AQ06141 175 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 FBXL19-AS1Q494R0 122 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 CDKN2A-AS1Q9UH64 79 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 CUL9Q8IWT3 2517 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 PTPN13Q12923 2485 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 BRK1Q8WUW1 75 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 B9D2Q9BPU9 175 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 LINC00467Q9BRT7 94 aa13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 KLK5Q9Y337 293 aaPredicted RBP13.38□□□□□ -0.27
LPCAT1-202ENST00000475622 DNAJC9-AS1A6NH13 148 aa13.37□□□□□ -0.27
LPCAT1-202ENST00000475622 NEXN-AS1Q8NBZ9 246 aa13.37□□□□□ -0.27
LPCAT1-202ENST00000475622 ODF3BA8MYP8 253 aa13.37□□□□□ -0.27
LPCAT1-202ENST00000475622 TNFRSF13BO14836 293 aaPredicted RBP13.37□□□□□ -0.27
LPCAT1-202ENST00000475622 IGKV4-1P06312 121 aa13.37□□□□□ -0.27
LPCAT1-202ENST00000475622 TP73-AS1Q9UF72 201 aa13.36□□□□□ -0.27
LPCAT1-202ENST00000475622 MT-ATP8P03928 68 aa13.36□□□□□ -0.27
LPCAT1-202ENST00000475622 LMO4P61968 165 aa13.36□□□□□ -0.27
LPCAT1-202ENST00000475622 Q6ZPA2 131 aa13.36□□□□□ -0.27
LPCAT1-202ENST00000475622 C20orf197Q8N268 126 aa13.36□□□□□ -0.27
LPCAT1-202ENST00000475622 SDIM1Q6ZPB5 146 aa13.36□□□□□ -0.27
LPCAT1-202ENST00000475622 IGF1P05019 195 aa13.35□□□□□ -0.27
LPCAT1-202ENST00000475622 LINC00574Q9H8X3 128 aa13.35□□□□□ -0.27
LPCAT1-202ENST00000475622 SEC61GP60059 68 aa13.35□□□□□ -0.27
LPCAT1-202ENST00000475622 ODF3Q96PU9 254 aa13.35□□□□□ -0.27
LPCAT1-202ENST00000475622 TANC1Q9C0D5 1861 aa13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 A0A096LNI7 61 aa13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 Q8NA96 180 aa13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 CHCHD10Q8WYQ3 142 aaPredicted RBP13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 NDUFV3P56181 108 aaKnown RBP13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 C11orf45Q8TAV5 145 aa13.34□□□□□ -0.27
LPCAT1-202ENST00000475622 FAM222AQ5U5X8 452 aa13.33□□□□□ -0.27
LPCAT1-202ENST00000475622 K7EQG2 157 aa13.33□□□□□ -0.28
LPCAT1-202ENST00000475622 C1orf229Q6ZS94 237 aaPredicted RBP13.33□□□□□ -0.28
LPCAT1-202ENST00000475622 SLPIP03973 132 aa13.33□□□□□ -0.28
LPCAT1-202ENST00000475622 MBD6Q96DN6 1003 aa13.32□□□□□ -0.28
LPCAT1-202ENST00000475622 C20orf173Q96LM9 149 aa13.32□□□□□ -0.28
LPCAT1-202ENST00000475622 IGLV4-3A0A075B6K6 122 aa13.32□□□□□ -0.28
LPCAT1-202ENST00000475622 NUP210Q8TEM1 1887 aaPredicted RBP13.32□□□□□ -0.28
LPCAT1-202ENST00000475622 TMEM223A0PJW6 202 aa13.32□□□□□ -0.28
LPCAT1-202ENST00000475622 SCXQ7RTU7 201 aa13.32□□□□□ -0.28
LPCAT1-202ENST00000475622 OTOGLQ3ZCN5 2332 aa13.31□□□□□ -0.28
LPCAT1-202ENST00000475622 NCOA6Q14686 2063 aaPredicted RBP13.31□□□□□ -0.28
LPCAT1-202ENST00000475622 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
LPCAT1-202ENST00000475622 OBSL1O75147 1896 aa13.3□□□□□ -0.28
LPCAT1-202ENST00000475622 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
LPCAT1-202ENST00000475622 PIK3CD-AS1Q5SR53 167 aa13.3□□□□□ -0.28
LPCAT1-202ENST00000475622 MAPKAPK5-AS1Q8N8E1 139 aa13.3□□□□□ -0.28
LPCAT1-202ENST00000475622 SPTSSBQ8NFR3 76 aa13.3□□□□□ -0.28
LPCAT1-202ENST00000475622 PLXNB1O43157 2135 aa13.29□□□□□ -0.28
LPCAT1-202ENST00000475622 DEFB114Q30KQ6 69 aa13.29□□□□□ -0.28
LPCAT1-202ENST00000475622 C2CD3Q4AC94 2353 aa13.29□□□□□ -0.28
LPCAT1-202ENST00000475622 C14orf177Q52M58 125 aa13.29□□□□□ -0.28
LPCAT1-202ENST00000475622 UQCRQO14949 82 aa13.28□□□□□ -0.28
LPCAT1-202ENST00000475622 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
LPCAT1-202ENST00000475622 TRIAP1O43715 76 aa13.28□□□□□ -0.28
LPCAT1-202ENST00000475622 MPLKIPQ8TAP9 179 aa13.28□□□□□ -0.28
LPCAT1-202ENST00000475622 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.28
LPCAT1-202ENST00000475622 CRIP1P50238 77 aa13.27□□□□□ -0.28
LPCAT1-202ENST00000475622 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
LPCAT1-202ENST00000475622 IBA57-AS1B1ANH7 110 aa13.27□□□□□ -0.29
LPCAT1-202ENST00000475622 XAGE1AQ9HD64 81 aa13.27□□□□□ -0.29
LPCAT1-202ENST00000475622 PLXNB3Q9ULL4 1909 aa13.27□□□□□ -0.29
LPCAT1-202ENST00000475622 M0QY20 66 aa13.26□□□□□ -0.29
LPCAT1-202ENST00000475622 H7C423 109 aa13.26□□□□□ -0.29
LPCAT1-202ENST00000475622 CRYGDP07320 174 aa13.26□□□□□ -0.29
LPCAT1-202ENST00000475622 SMIM9A6NGZ8 99 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 USP17L23D6RBM5 183 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 CRIP3Q6Q6R5 217 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 CFAP126Q5VTH2 177 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 COL4A3Q01955 1670 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 FAM236DA0A1B0GTK5 79 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 FAM236CP0DP71 79 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 EIF4EBP1Q13541 118 aaPredicted RBP13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 Q6YL49 198 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 DOPEY1Q5JWR5 2465 aa13.25□□□□□ -0.29
LPCAT1-202ENST00000475622 CASC2Q6XLA1 102 aa13.24□□□□□ -0.29
LPCAT1-202ENST00000475622 A0A087WZ39 114 aa13.24□□□□□ -0.29
LPCAT1-202ENST00000475622 C22orf34Q6ZV56 151 aa13.24□□□□□ -0.29
LPCAT1-202ENST00000475622 ZFAND3Q9H8U3 227 aa13.24□□□□□ -0.29
LPCAT1-202ENST00000475622 C19orf84I3L1E1 186 aa13.24□□□□□ -0.29
LPCAT1-202ENST00000475622 RNF185Q96GF1 192 aa13.24□□□□□ -0.29
LPCAT1-202ENST00000475622 PROK1P58294 105 aa13.23□□□□□ -0.29
LPCAT1-202ENST00000475622 ATP5EP2Q5VTU8 51 aa13.23□□□□□ -0.29
LPCAT1-202ENST00000475622 Q8N976 141 aa13.23□□□□□ -0.29
LPCAT1-202ENST00000475622 TRBV6-8A0A0A6YYG3 113 aa13.23□□□□□ -0.29
LPCAT1-202ENST00000475622 TRBV30A0A0K0K1B3 111 aa13.23□□□□□ -0.29
LPCAT1-202ENST00000475622 DEFB131BA0A096LNP1 70 aa13.22□□□□□ -0.29
LPCAT1-202ENST00000475622 C6orf99Q4VX62 202 aa13.22□□□□□ -0.29
LPCAT1-202ENST00000475622 MED12LQ86YW9 2145 aa13.22□□□□□ -0.29
LPCAT1-202ENST00000475622 U3KQK5 164 aa13.21□□□□□ -0.29
LPCAT1-202ENST00000475622 LRCOL1A6NCL2 159 aa13.21□□□□□ -0.3
LPCAT1-202ENST00000475622 IGHV4-31P0DP07 118 aa13.21□□□□□ -0.3
LPCAT1-202ENST00000475622 DCANP1Q8TF63 244 aa13.21□□□□□ -0.3
LPCAT1-202ENST00000475622 A8MZ25 164 aa13.2□□□□□ -0.3
LPCAT1-202ENST00000475622 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms