RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CCDC140Q96MF4 163 aa8.31□□□□□ -1.08
VAPB-204ENST00000475243 TMEM256-PLSCR3K7ERE1 68 aa8.3□□□□□ -1.08
VAPB-204ENST00000475243 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
VAPB-204ENST00000475243 HIGD2AQ9BW72 106 aa8.3□□□□□ -1.08
VAPB-204ENST00000475243 AGRNO00468 2067 aa8.3□□□□□ -1.08
VAPB-204ENST00000475243 LOXL1Q08397 574 aaPredicted RBP8.3□□□□□ -1.08
VAPB-204ENST00000475243 IGHV4-31P0DP07 118 aa8.3□□□□□ -1.08
VAPB-204ENST00000475243 SPRY4Q9C004 299 aa8.3□□□□□ -1.08
VAPB-204ENST00000475243 IGKV1D-37A0A075B6S9 117 aa8.3□□□□□ -1.08
VAPB-204ENST00000475243 LINC00322Q6ZN03 302 aaPredicted RBP8.3□□□□□ -1.08
VAPB-204ENST00000475243 TEN1Q86WV5 123 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 C2CD3Q4AC94 2353 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 CXCL5P42830 114 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 LMO4P61968 165 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 PTH2Q96A98 100 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 IGKV4-1P06312 121 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 C22orf34Q6ZV56 151 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 LYPD6Q86Y78 171 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 INSL3P51460 131 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 LINC00482Q8N8I6 264 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 MED14OSP0DP75 135 aa8.29□□□□□ -1.08
VAPB-204ENST00000475243 CRYGDP07320 174 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
VAPB-204ENST00000475243 B9D2Q9BPU9 175 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.28□□□□□ -1.08
VAPB-204ENST00000475243 IGF1P05019 195 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 REG3AQ06141 175 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 LINC00467Q9BRT7 94 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 COX7BP24311 80 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 TMEM89A2RUT3 159 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 COL4A4P53420 1690 aaPredicted RBP8.28□□□□□ -1.08
VAPB-204ENST00000475243 PRORYQ9H606 182 aa8.28□□□□□ -1.08
VAPB-204ENST00000475243 JMJD7-PLA2G4BH0Y9G9 81 aa8.27□□□□□ -1.08
VAPB-204ENST00000475243 TNFRSF13BO14836 293 aaPredicted RBP8.27□□□□□ -1.08
VAPB-204ENST00000475243 NDUFA11Q86Y39 141 aa8.27□□□□□ -1.08
VAPB-204ENST00000475243 C20orf173Q96LM9 149 aa8.27□□□□□ -1.08
VAPB-204ENST00000475243 EP400Q96L91 3159 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 DEFB131BA0A096LNP1 70 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 C19orf71A6NCJ1 209 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 FBXL19-AS1Q494R0 122 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 TRBV10-2A0A0K0K1G8 114 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 ATOX1O00244 68 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 ZFAND2AQ8N6M9 145 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 CRYGBP07316 175 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 H3BQ85 93 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 TAX1BP3O14907 124 aa8.27□□□□□ -1.09
VAPB-204ENST00000475243 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
VAPB-204ENST00000475243 C10orf99Q6UWK7 81 aa8.26□□□□□ -1.09
VAPB-204ENST00000475243 A0A087WZ39 114 aa8.26□□□□□ -1.09
VAPB-204ENST00000475243 FOXI1Q12951 378 aa8.26□□□□□ -1.09
VAPB-204ENST00000475243 Q6YL49 198 aa8.26□□□□□ -1.09
VAPB-204ENST00000475243 HIGD1BQ9P298 99 aa8.26□□□□□ -1.09
VAPB-204ENST00000475243 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
VAPB-204ENST00000475243 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
VAPB-204ENST00000475243 DEFB114Q30KQ6 69 aa8.25□□□□□ -1.09
VAPB-204ENST00000475243 TRBV10-1A0A0K0K1A3 114 aa8.25□□□□□ -1.09
VAPB-204ENST00000475243 PROK1P58294 105 aa8.25□□□□□ -1.09
VAPB-204ENST00000475243 SLPIP03973 132 aa8.25□□□□□ -1.09
VAPB-204ENST00000475243 MIAQ16674 131 aa8.25□□□□□ -1.09
VAPB-204ENST00000475243 CHCHD10Q8WYQ3 142 aaPredicted RBP8.25□□□□□ -1.09
VAPB-204ENST00000475243 ADAMTS20P59510 1910 aa8.24□□□□□ -1.09
VAPB-204ENST00000475243 IGLV2-18A0A075B6J9 118 aa8.24□□□□□ -1.09
VAPB-204ENST00000475243 TCL1BO95988 128 aa8.24□□□□□ -1.09
VAPB-204ENST00000475243 SMIM20Q8N5G0 67 aa8.24□□□□□ -1.09
VAPB-204ENST00000475243 CPAMD8Q8IZJ3 1885 aa8.24□□□□□ -1.09
VAPB-204ENST00000475243 ODF3BA8MYP8 253 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 A0A0J9YXY3 114 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 SEC61GP60059 68 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 HILS1P60008 231 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 FAM19A1Q7Z5A9 133 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 M0R2N4 97 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
VAPB-204ENST00000475243 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
VAPB-204ENST00000475243 PIK3CD-AS1Q5SR53 167 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 RNASE8Q8TDE3 154 aaKnown RBP8.22□□□□□ -1.09
VAPB-204ENST00000475243 DCANP1Q8TF63 244 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 C14orf177Q52M58 125 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 UFSP1Q6NVU6 142 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 BPY2O14599 106 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 PRM2P04554 102 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 CENPFP49454 3210 aa8.22□□□□□ -1.09
VAPB-204ENST00000475243 ZFYVE26Q68DK2 2539 aa8.21□□□□□ -1.09
VAPB-204ENST00000475243 BRWD1-AS2P59051 145 aa8.21□□□□□ -1.09
VAPB-204ENST00000475243 Q6ZPA2 131 aa8.21□□□□□ -1.09
VAPB-204ENST00000475243 SPATA12Q7Z6I5 190 aa8.21□□□□□ -1.09
VAPB-204ENST00000475243 UPK3BQ9BT76 320 aa8.21□□□□□ -1.09
VAPB-204ENST00000475243 K7EQG2 157 aa8.21□□□□□ -1.09
VAPB-204ENST00000475243 ZNF843Q8N446 348 aa8.21□□□□□ -1.09
VAPB-204ENST00000475243 Q8N976 141 aa8.21□□□□□ -1.1
VAPB-204ENST00000475243 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
VAPB-204ENST00000475243 IL17DQ8TAD2 202 aa8.21□□□□□ -1.1
VAPB-204ENST00000475243 IGLV2-8P01709 118 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 C11orf1Q9H5F2 150 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 PTPRBP23467 1997 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 SDIM1Q6ZPB5 146 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms