RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 FAM236BA0A1B0GV22 79 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 EPM2AB3EWF7 344 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 H3BRN7 92 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 TRACP01848 142 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 OR5AL1P0C617 328 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 SHANK2-AS3Q9BTD1 123 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 KCNIP2Q9NS61 270 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 HIGD1BQ9P298 99 aa8.34□□□□□ -1.08
HLA-DOB-208ENST00000475235 TENM2Q9NT68 2774 aa8.33□□□□□ -1.08
HLA-DOB-208ENST00000475235 IGHV4-28A0A0C4DH34 117 aa8.33□□□□□ -1.08
HLA-DOB-208ENST00000475235 CCL20P78556 96 aa8.33□□□□□ -1.08
HLA-DOB-208ENST00000475235 X6R8D5 127 aa8.33□□□□□ -1.08
HLA-DOB-208ENST00000475235 GRIFINA4D1Z8 144 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 H7C1H1 209 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 DEFB4AO15263 64 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 APCSP02743 223 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 NANOS2P60321 138 aaKnown RBP8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 ARL16Q0P5N6 197 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 GDF5OSQ5U4N7 250 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 CFAP126Q5VTH2 177 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 LINC00476Q8WZB0 136 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 AAMDCQ9H7C9 122 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 SLC39A9Q9NUM3 307 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 XCL2Q9UBD3 114 aa8.32□□□□□ -1.08
HLA-DOB-208ENST00000475235 C11orf94C9JXX5 98 aa8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 RBMY1A1P0DJD3 496 aaKnown RBP8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 RBMY1CP0DJD4 496 aa8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 COX7CP15954 63 aa8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 LINC01600Q96MT4 127 aa8.31□□□□□ -1.08
HLA-DOB-208ENST00000475235 A0A0J9YX75 114 aa8.3□□□□□ -1.08
HLA-DOB-208ENST00000475235 C17orf77Q96MU5 243 aa8.3□□□□□ -1.08
HLA-DOB-208ENST00000475235 C11orf1Q9H5F2 150 aa8.3□□□□□ -1.08
HLA-DOB-208ENST00000475235 ARL2-SNX15V9GYD0 113 aa8.3□□□□□ -1.08
HLA-DOB-208ENST00000475235 HYDINQ4G0P3 5121 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 TRAV26-2A0A0B4J265 109 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 FAM24AA6NFZ4 105 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 COX7A2P2O60397 106 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 CST7O76096 145 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 LY6G6CO95867 125 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 DEFB1P60022 68 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 HBG1P69891 147 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 HBG2P69892 147 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 PATE2Q6UY27 113 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 C15orf53Q8NAA6 179 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 MGST2Q99735 147 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 AGPAT4-IT1Q9H0P7 198 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 Q9UF83 564 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 F6UB75 175 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 HLA-DQA1P01909 254 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 Q6ZRU5 148 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 LINC00305Q7Z4B0 112 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 WDR83OSQ9Y284 106 aa8.29□□□□□ -1.08
HLA-DOB-208ENST00000475235 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
HLA-DOB-208ENST00000475235 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
HLA-DOB-208ENST00000475235 A8MTW9 85 aa8.28□□□□□ -1.08
HLA-DOB-208ENST00000475235 A8MWL6 223 aa8.28□□□□□ -1.08
HLA-DOB-208ENST00000475235 PYYP10082 97 aa8.28□□□□□ -1.08
HLA-DOB-208ENST00000475235 FXYD7P58549 80 aa8.28□□□□□ -1.08
HLA-DOB-208ENST00000475235 C10orf113Q5VZT2 155 aa8.28□□□□□ -1.08
HLA-DOB-208ENST00000475235 IGHV3OR16-12A0A075B7B8 117 aa8.27□□□□□ -1.09
HLA-DOB-208ENST00000475235 TRAV10A0A0B4J240 114 aa8.27□□□□□ -1.09
HLA-DOB-208ENST00000475235 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.09
HLA-DOB-208ENST00000475235 IGLL5B9A064 214 aa8.27□□□□□ -1.09
HLA-DOB-208ENST00000475235 LGALS9CQ6DKI2 356 aa8.27□□□□□ -1.09
HLA-DOB-208ENST00000475235 ZC2HC1AQ96GY0 325 aa8.27□□□□□ -1.09
HLA-DOB-208ENST00000475235 SLC50A1Q9BRV3 221 aa8.27□□□□□ -1.09
HLA-DOB-208ENST00000475235 UBE2L5PA0A1B0GUS4 154 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 MRPS12O15235 138 aaKnown RBP8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 FGF6P10767 208 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 C12orf74Q32Q52 190 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 IGFL4Q6B9Z1 124 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 Q6ZTC4 211 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 CEND1Q8N111 149 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 RNF182Q8N6D2 247 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 IGF2BP2-AS1Q96M15 143 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 TXNDC17Q9BRA2 123 aa8.26□□□□□ -1.09
HLA-DOB-208ENST00000475235 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
HLA-DOB-208ENST00000475235 SPART-AS1P0CW21 52 aa8.25□□□□□ -1.09
HLA-DOB-208ENST00000475235 MIC13Q5XKP0 118 aa8.25□□□□□ -1.09
HLA-DOB-208ENST00000475235 IL36BQ9NZH7 164 aa8.25□□□□□ -1.09
HLA-DOB-208ENST00000475235 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
HLA-DOB-208ENST00000475235 INSP01308 110 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 P01737 135 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 PQLC2Q6ZP29 291 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 OR8A1Q8NGG7 326 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 ZNF331Q9NQX6 463 aaPredicted RBP8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms