RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TP53TG1Q9Y2A0 90 aa15.75■□□□□ 0.11
SH3D21-202ENST00000474766 K7EMT4 169 aa15.74■□□□□ 0.11
SH3D21-202ENST00000474766 ESM1Q9NQ30 184 aa15.74■□□□□ 0.11
SH3D21-202ENST00000474766 DEFB1P60022 68 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 ZNF876PQ49A33 203 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 POLR2KP53803 58 aaKnown RBP15.73■□□□□ 0.11
SH3D21-202ENST00000474766 TSPEAR-AS2P59090 65 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 HILS1P60008 231 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 RPL11P62913 178 aaKnown RBP15.73■□□□□ 0.11
SH3D21-202ENST00000474766 GAGE2BQ13066 116 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 ANXA2RQ3ZCQ2 193 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 GAGE2EQ4V326 116 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 SPANXA1Q9NS26 97 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 GAGE2DQ9UEU5 116 aa15.73■□□□□ 0.11
SH3D21-202ENST00000474766 J3QQQ9 107 aa15.72■□□□□ 0.11
SH3D21-202ENST00000474766 VCYO14598 125 aa15.72■□□□□ 0.11
SH3D21-202ENST00000474766 IGHV3-33P01772 117 aa15.72■□□□□ 0.11
SH3D21-202ENST00000474766 PSMB8P28062 276 aa15.72■□□□□ 0.11
SH3D21-202ENST00000474766 C9JAW5 83 aa15.72■□□□□ 0.11
SH3D21-202ENST00000474766 NHLRC4P0CG21 123 aaPredicted RBP15.72■□□□□ 0.11
SH3D21-202ENST00000474766 LGALS3P17931 250 aaKnown RBP15.72■□□□□ 0.11
SH3D21-202ENST00000474766 Q6YL49 198 aa15.72■□□□□ 0.11
SH3D21-202ENST00000474766 KIF25-AS1Q9Y6Z4 181 aa15.72■□□□□ 0.11
SH3D21-202ENST00000474766 SNCGO76070 127 aa15.71■□□□□ 0.11
SH3D21-202ENST00000474766 IGHV4-59P01825 116 aa15.71■□□□□ 0.11
SH3D21-202ENST00000474766 TMEM263Q8WUH6 116 aaKnown RBP15.71■□□□□ 0.11
SH3D21-202ENST00000474766 F6UB75 175 aa15.7■□□□□ 0.1
SH3D21-202ENST00000474766 RPL13AP40429 203 aaKnown RBP15.7■□□□□ 0.1
SH3D21-202ENST00000474766 LINC00315P59091 139 aa15.7■□□□□ 0.1
SH3D21-202ENST00000474766 DUX5Q96PT3 197 aa15.7■□□□□ 0.1
SH3D21-202ENST00000474766 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.7■□□□□ 0.1
SH3D21-202ENST00000474766 RNASE3P12724 160 aaKnown RBP15.7■□□□□ 0.1
SH3D21-202ENST00000474766 TMEM170BQ5T4T1 132 aa15.7■□□□□ 0.1
SH3D21-202ENST00000474766 DNAJC9-AS1A6NH13 148 aa15.69■□□□□ 0.1
SH3D21-202ENST00000474766 LEPROTO15243 131 aa15.69■□□□□ 0.1
SH3D21-202ENST00000474766 NDUFV3P56181 108 aaKnown RBP15.69■□□□□ 0.1
SH3D21-202ENST00000474766 ATXN8Q156A1 80 aa15.69■□□□□ 0.1
SH3D21-202ENST00000474766 TMEM89A2RUT3 159 aa15.68■□□□□ 0.1
SH3D21-202ENST00000474766 A4D1N5 150 aa15.68■□□□□ 0.1
SH3D21-202ENST00000474766 RNASE4P34096 147 aaKnown RBP15.68■□□□□ 0.1
SH3D21-202ENST00000474766 ZNRF2Q8NHG8 242 aa15.68■□□□□ 0.1
SH3D21-202ENST00000474766 IGKV3-7A0A075B6H7 116 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 A0A0J9YX75 114 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 EDN2P20800 178 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 KRTAP21-3Q3LHN1 58 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 DCANP1Q8TF63 244 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 TRBV6-5A0A0K0K1A5 114 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 EMP1P54849 157 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 KRTAP24-1Q3LI83 254 aa15.67■□□□□ 0.1
SH3D21-202ENST00000474766 GAGE12JA6NER3 117 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 SPRY2O43597 315 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 GAGE7O76087 117 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 GAGE12FP0CL80 117 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 GAGE12GP0CL81 117 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 GAGE12IP0CL82 117 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 GAGE4Q13068 117 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 Q8N1Y9 231 aa15.66■□□□□ 0.1
SH3D21-202ENST00000474766 TRBV27A0A0K0K1C4 114 aa15.65■□□□□ 0.1
SH3D21-202ENST00000474766 KLLNB2CW77 178 aa15.65■□□□□ 0.1
SH3D21-202ENST00000474766 B5MCH6 92 aa15.65■□□□□ 0.1
SH3D21-202ENST00000474766 ID1P41134 155 aa15.65■□□□□ 0.1
SH3D21-202ENST00000474766 COL6A5A8TX70 2615 aa15.65■□□□□ 0.1
SH3D21-202ENST00000474766 IFITM1P13164 125 aa15.65■□□□□ 0.1
SH3D21-202ENST00000474766 LINC01620Q4KN68 170 aa15.65■□□□□ 0.1
SH3D21-202ENST00000474766 TMEM223A0PJW6 202 aa15.64■□□□□ 0.09
SH3D21-202ENST00000474766 GNRH2O43555 120 aa15.64■□□□□ 0.09
SH3D21-202ENST00000474766 EIF4EBP3O60516 100 aaPredicted RBP15.64■□□□□ 0.09
SH3D21-202ENST00000474766 TTC32Q5I0X7 151 aa15.64■□□□□ 0.09
SH3D21-202ENST00000474766 SUMO4Q6EEV6 95 aa15.64■□□□□ 0.09
SH3D21-202ENST00000474766 TRPT1Q86TN4 253 aaKnown RBP15.64■□□□□ 0.09
SH3D21-202ENST00000474766 MDFIQ99750 246 aa15.64■□□□□ 0.09
SH3D21-202ENST00000474766 TRBV30A0A0K0K1B3 111 aa15.63■□□□□ 0.09
SH3D21-202ENST00000474766 TRBV10-2A0A0K0K1G8 114 aa15.63■□□□□ 0.09
SH3D21-202ENST00000474766 RPL39P62891 51 aaKnown RBP15.63■□□□□ 0.09
SH3D21-202ENST00000474766 MRPL23Q16540 153 aaKnown RBP15.63■□□□□ 0.09
SH3D21-202ENST00000474766 C10orf99Q6UWK7 81 aa15.63■□□□□ 0.09
SH3D21-202ENST00000474766 NTN5Q8WTR8 489 aaPredicted RBP15.63■□□□□ 0.09
SH3D21-202ENST00000474766 SDHAF1A6NFY7 115 aa15.63■□□□□ 0.09
SH3D21-202ENST00000474766 RHOHQ15669 191 aa15.63■□□□□ 0.09
SH3D21-202ENST00000474766 TRAV4A0A0B4J268 109 aa15.62■□□□□ 0.09
SH3D21-202ENST00000474766 TRAV8-4A0A0B4J246 113 aa15.61■□□□□ 0.09
SH3D21-202ENST00000474766 LGALS9O00182 355 aa15.61■□□□□ 0.09
SH3D21-202ENST00000474766 NSUN5P1Q3KNT7 163 aa15.61■□□□□ 0.09
SH3D21-202ENST00000474766 SMIM20Q8N5G0 67 aa15.61■□□□□ 0.09
SH3D21-202ENST00000474766 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.61■□□□□ 0.09
SH3D21-202ENST00000474766 RNASE1P07998 156 aaKnown RBP15.61■□□□□ 0.09
SH3D21-202ENST00000474766 M0R2P5 195 aa15.6■□□□□ 0.09
SH3D21-202ENST00000474766 MUSTN1Q8IVN3 82 aa15.6■□□□□ 0.09
SH3D21-202ENST00000474766 TMEM86BQ8N661 226 aa15.6■□□□□ 0.09
SH3D21-202ENST00000474766 VPREB3Q9UKI3 123 aa15.6■□□□□ 0.09
SH3D21-202ENST00000474766 TRAV2A0A0B4J234 112 aa15.59■□□□□ 0.09
SH3D21-202ENST00000474766 ODF3Q96PU9 254 aa15.59■□□□□ 0.09
SH3D21-202ENST00000474766 MDFICQ9P1T7 246 aa15.59■□□□□ 0.09
SH3D21-202ENST00000474766 WIPF1O43516 503 aa15.58■□□□□ 0.09
SH3D21-202ENST00000474766 C5orf47Q569G3 176 aa15.58■□□□□ 0.09
SH3D21-202ENST00000474766 MUC4Q99102 2169 aa15.58■□□□□ 0.08
SH3D21-202ENST00000474766 H3BMM0 161 aa15.57■□□□□ 0.08
SH3D21-202ENST00000474766 Q1RN00 199 aa15.57■□□□□ 0.08
SH3D21-202ENST00000474766 UBE2WQ96B02 151 aa15.57■□□□□ 0.08
SH3D21-202ENST00000474766 ZNF22P17026 224 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms