RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ATOX1O00244 68 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 ARMS2P0C7Q2 107 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 CKS2P33552 79 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 ATXN8Q156A1 80 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 ZNF56Q15929 161 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 SPINK9Q5DT21 86 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 C10orf113Q5VZT2 155 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 LINC00322Q6ZN03 302 aaPredicted RBP2.35□□□□□ -2.03
BRCA1-212ENST00000473961 LINC00643Q86TS7 51 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 NDUFA11Q86Y39 141 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 PRO1854Q9UHT4 67 aa2.35□□□□□ -2.03
BRCA1-212ENST00000473961 PTPRBP23467 1997 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 IGKV3D-11A0A0A0MRZ8 115 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 TRAV17A0A0B4J275 112 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 A0A0J9YW62 118 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 FAM236AA0A1B0GUQ0 79 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 FAM236BA0A1B0GV22 79 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 F8VRH5 84 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 K7EMI3 77 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 OVOL1O14753 267 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 TCRAP04437 139 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 COL8A2P25067 703 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 MRPL51Q4U2R6 128 aaKnown RBP2.34□□□□□ -2.03
BRCA1-212ENST00000473961 HES3Q5TGS1 186 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 Q5XG85 94 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 HRCT1Q6UXD1 115 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 C3orf56Q8N813 242 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 Q8N8P6 123 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 PLEKHB2Q96CS7 222 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 HIGD2AQ9BW72 106 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 RTL8AQ9BWD3 113 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 OTORQ9NRC9 128 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 TMEM14BQ9NUH8 114 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 CCL26Q9Y258 94 aa2.34□□□□□ -2.03
BRCA1-212ENST00000473961 MYO9BQ13459 2157 aa2.34□□□□□ -2.04
BRCA1-212ENST00000473961 MUC22E2RYF6 1773 aaPredicted RBP2.33□□□□□ -2.04
BRCA1-212ENST00000473961 TANC2Q9HCD6 1990 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.33□□□□□ -2.04
BRCA1-212ENST00000473961 TRAV13-1A0A0B4J241 112 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 ZNF815PA8K554 130 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 RTL8CO15255 209 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 CGB3P0DN86 165 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 CGB7P0DN87 165 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 PYYP10082 97 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 COX6A1P12074 109 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 SLC25A16P16260 332 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 PSMB8P28062 276 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 CCL8P80075 99 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 PRCDQ00LT1 54 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 C2orf82Q6UX34 121 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 Q6ZRU5 148 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 GOLT1AQ6ZVE7 132 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 Q86TA4 180 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 RPS19BP1Q86WX3 136 aaKnown RBP2.33□□□□□ -2.04
BRCA1-212ENST00000473961 TMEM75Q8N9X5 138 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 TM2D3Q9BRN9 247 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 AGPAT4-IT1Q9H0P7 198 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 MRPL35Q9NZE8 188 aaKnown RBP2.33□□□□□ -2.04
BRCA1-212ENST00000473961 MYOFQ9NZM1 2061 aa2.33□□□□□ -2.04
BRCA1-212ENST00000473961 CEP192Q8TEP8 1941 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 TRBV30A0A0K0K1B3 111 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 TEX49A0A1B0GTD5 131 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 NDUFA3O95167 84 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 IGHV3-30P01768 117 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 IGHV3-33P01772 117 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 COX6CP09669 75 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 IGHV3-30-5P0DP03 117 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 RNASE2P10153 161 aaKnown RBP2.32□□□□□ -2.04
BRCA1-212ENST00000473961 EFNA4P52798 201 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 FXYD7P58549 80 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 HIST1H4AP62805 103 aaKnown RBP2.32□□□□□ -2.04
BRCA1-212ENST00000473961 ERHP84090 104 aaKnown RBP2.32□□□□□ -2.04
BRCA1-212ENST00000473961 DEFB110Q30KQ9 67 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 LYZL1Q6UWQ5 148 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 PATE2Q6UY27 113 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 AAED1Q7RTV5 226 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 LINC00305Q7Z4B0 112 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 TMEM86BQ8N661 226 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 SERP2Q8N6R1 65 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 COPS9Q8WXC6 57 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 DYNLRB1Q9NP97 96 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 TMEM14CQ9P0S9 112 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 KLK5Q9Y337 293 aaPredicted RBP2.32□□□□□ -2.04
BRCA1-212ENST00000473961 R4GN34 69 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 TNRC6BQ9UPQ9 1833 aaKnown RBP2.32□□□□□ -2.04
BRCA1-212ENST00000473961 EML6Q6ZMW3 1958 aa2.32□□□□□ -2.04
BRCA1-212ENST00000473961 TRAV12-2A0A075B6T6 113 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 TRAV3A0A0B4J244 114 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 A0A0J9YY99 117 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 hADV29S1A0JD25 119 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 LY6LH3BQJ8 138 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 J3QQQ9 107 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 NDUFC2O95298 119 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms